Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CSNK1A1P48729 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.34□□□□□ -1.55
CSNK1A1P48729 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CSNK1A1P48729 AC022164.1-201ENST00000568767 2673 ntBASIC5.34□□□□□ -1.55
CSNK1A1P48729 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CSNK1A1P48729 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CSNK1A1P48729 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CSNK1A1P48729 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 RBMY1HP-201ENST00000382759 1389 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 SNRPEP6-201ENST00000407465 277 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 MIR1275-201ENST00000408770 80 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 DPPA2P2-201ENST00000418220 897 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 AC097463.1-201ENST00000447288 481 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 AC118758.1-202ENST00000454719 225 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 AC009963.3-201ENST00000458090 486 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 AC005165.2-201ENST00000466070 380 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 AL117692.1-201ENST00000494283 713 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 OR1E3-201ENST00000575608 948 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 AL359091.2-201ENST00000609303 556 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 AC004801.6-201ENST00000616571 978 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 GNL2P1-201ENST00000451274 2190 ntBASIC5.33□□□□□ -1.56
CSNK1A1P48729 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CSNK1A1P48729 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CSNK1A1P48729 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 CDY11P-201ENST00000447168 1651 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC117434.1-201ENST00000419971 836 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC098847.1-201ENST00000473094 348 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC092865.4-201ENST00000477936 615 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 RN7SKP288-201ENST00000516227 268 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC009879.1-201ENST00000520029 839 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AL049779.3-201ENST00000557141 606 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC002310.3-201ENST00000569728 723 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC016839.1-201ENST00000578162 867 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC124916.2-201ENST00000604416 224 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 AL139041.1-201ENST00000605480 610 ntBASIC5.32□□□□□ -1.56
CSNK1A1P48729 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSNK1A1P48729 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms