Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.95□□□□□ -1.46
RPA3P35244 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPA3P35244 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.95□□□□□ -1.46
RPA3P35244 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
RPA3P35244 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RPA3P35244 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.94□□□□□ -1.46
RPA3P35244 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.94□□□□□ -1.46
RPA3P35244 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.94□□□□□ -1.46
RPA3P35244 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RPA3P35244 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.94□□□□□ -1.46
RPA3P35244 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.94□□□□□ -1.46
RPA3P35244 AL132875.1-201ENST00000403623 949 ntBASIC5.94□□□□□ -1.46
RPA3P35244 GCNT1P4-201ENST00000404096 329 ntBASIC5.94□□□□□ -1.46
RPA3P35244 RN7SKP108-201ENST00000411367 328 ntBASIC5.94□□□□□ -1.46
RPA3P35244 AL096829.1-201ENST00000413677 457 ntBASIC5.94□□□□□ -1.46
RPA3P35244 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 AC242426.1-201ENST00000435270 960 ntBASIC5.94□□□□□ -1.46
RPA3P35244 RPL5P7-201ENST00000444235 813 ntBASIC5.94□□□□□ -1.46
RPA3P35244 OR52I1-201ENST00000450052 1050 ntBASIC5.94□□□□□ -1.46
RPA3P35244 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.94□□□□□ -1.46
RPA3P35244 AC002553.3-201ENST00000453002 341 ntBASIC5.94□□□□□ -1.46
RPA3P35244 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.94□□□□□ -1.46
RPA3P35244 AC104339.1-201ENST00000465478 348 ntBASIC5.94□□□□□ -1.46
RPA3P35244 AC091874.2-201ENST00000505889 720 ntBASIC5.94□□□□□ -1.46
RPA3P35244 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.94□□□□□ -1.46
RPA3P35244 OR7E158P-201ENST00000524483 910 ntBASIC5.94□□□□□ -1.46
RPA3P35244 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.94□□□□□ -1.46
RPA3P35244 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.94□□□□□ -1.46
RPA3P35244 AC007346.1-201ENST00000569208 867 ntBASIC5.94□□□□□ -1.46
RPA3P35244 OR1E3-201ENST00000575608 948 ntBASIC5.94□□□□□ -1.46
RPA3P35244 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.94□□□□□ -1.46
RPA3P35244 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.94□□□□□ -1.46
RPA3P35244 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.94□□□□□ -1.46
RPA3P35244 FAM27E2-201ENST00000619668 403 ntBASIC5.94□□□□□ -1.46
RPA3P35244 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.94□□□□□ -1.46
RPA3P35244 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.94□□□□□ -1.46
RPA3P35244 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RPA3P35244 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RPA3P35244 AC083837.1-201ENST00000565297 2994 ntBASIC5.94□□□□□ -1.46
RPA3P35244 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RPA3P35244 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.93□□□□□ -1.46
RPA3P35244 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.93□□□□□ -1.46
RPA3P35244 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.93□□□□□ -1.46
RPA3P35244 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.93□□□□□ -1.46
RPA3P35244 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.93□□□□□ -1.46
RPA3P35244 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RPA3P35244 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RPA3P35244 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
RPA3P35244 AC023632.6-201ENST00000624338 2177 ntBASIC5.93□□□□□ -1.46
RPA3P35244 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
RPA3P35244 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.93□□□□□ -1.46
RPA3P35244 AC009506.2-201ENST00000420635 840 ntBASIC5.93□□□□□ -1.46
RPA3P35244 CRIP1P1-201ENST00000427567 185 ntBASIC5.93□□□□□ -1.46
RPA3P35244 AC138761.5-201ENST00000433967 325 ntBASIC5.93□□□□□ -1.46
RPA3P35244 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.93□□□□□ -1.46
RPA3P35244 MTND2P40-201ENST00000436718 841 ntBASIC5.93□□□□□ -1.46
RPA3P35244 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC5.93□□□□□ -1.46
RPA3P35244 RPL38P3-201ENST00000484463 213 ntBASIC5.93□□□□□ -1.46
RPA3P35244 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.93□□□□□ -1.46
RPA3P35244 RNA5SP434-201ENST00000516647 121 ntBASIC5.93□□□□□ -1.46
RPA3P35244 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.93□□□□□ -1.46
RPA3P35244 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.93□□□□□ -1.46
RPA3P35244 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.93□□□□□ -1.46
RPA3P35244 AL513327.3-201ENST00000602618 469 ntBASIC5.93□□□□□ -1.46
RPA3P35244 AC073333.2-201ENST00000603589 769 ntBASIC5.93□□□□□ -1.46
RPA3P35244 MIR7109-201ENST00000613748 65 ntBASIC5.93□□□□□ -1.46
RPA3P35244 AC015712.7-201ENST00000615211 635 ntBASIC5.93□□□□□ -1.46
RPA3P35244 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.93□□□□□ -1.46
RPA3P35244 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
RPA3P35244 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RPA3P35244 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.93□□□□□ -1.46
RPA3P35244 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPA3P35244 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
RPA3P35244 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPA3P35244 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.92□□□□□ -1.46
RPA3P35244 MARK2P4-201ENST00000503381 2380 ntBASIC5.92□□□□□ -1.46
RPA3P35244 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RPA3P35244 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RPA3P35244 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RPA3P35244 SNORA21-201ENST00000362423 132 ntBASIC5.92□□□□□ -1.46
RPA3P35244 RNU1-134P-201ENST00000362935 165 ntBASIC5.92□□□□□ -1.46
RPA3P35244 RNU1-65P-201ENST00000363919 148 ntBASIC5.92□□□□□ -1.46
RPA3P35244 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms