Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 THAP12P5-201ENST00000405864 2275 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 GVINP1-202ENST00000531871 7271 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 MTHFD2P5-201ENST00000320415 844 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 RNU1-49P-201ENST00000363468 159 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 CTSL3P-202ENST00000412179 788 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AL133482.1-201ENST00000415988 498 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 PPIAP10-201ENST00000438675 458 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AL359265.1-201ENST00000440296 795 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 RN7SL326P-201ENST00000477493 296 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC114940.1-201ENST00000512162 1265 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 Y_RNA.710-201ENST00000516975 110 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 IGLV3-24-201ENST00000517477 197 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AL121594.2-201ENST00000541658 472 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 MIR3936-201ENST00000584304 110 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC099777.1-201ENST00000603779 1070 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC141002.1-201ENST00000607025 279 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 MIR6762-201ENST00000613340 86 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 BNIP3P41-202ENST00000616656 861 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 QRSL1P3-201ENST00000552666 1316 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC073136.1-201ENST00000449426 2884 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DMAP28067 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 AC093849.1-201ENST00000563631 2209 ntBASIC5.11□□□□□ -1.59
HLA-DMAP28067 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DMAP28067 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DMAP28067 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DMAP28067 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC133552.1-201ENST00000569988 4007 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DMAP28067 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DMAP28067 RNA5SP429-201ENST00000363688 109 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 RNA5SP279-201ENST00000365513 117 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC019178.1-201ENST00000392337 440 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 AL050305.1-201ENST00000399993 1230 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 MIR1231-201ENST00000408101 92 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DMAP28067 RN7SKP121-201ENST00000410842 305 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 MYL6P5-201ENST00000412707 459 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 NPM1P40-201ENST00000412758 733 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 HSPE1P16-201ENST00000426640 348 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 E2F6P1-201ENST00000428850 745 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 E2F6P3-201ENST00000441743 743 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 COL11A2P1-205ENST00000441798 676 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC012512.1-201ENST00000446594 718 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AP001858.2-201ENST00000536213 601 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 RN7SL131P-201ENST00000579043 256 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 MIR3187-201ENST00000583431 70 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC022106.1-201ENST00000612834 766 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DMAP28067 AC010998.3-201ENST00000613871 631 ntBASIC5.1□□□□□ -1.59
HLA-DMAP28067 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms