Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 AC011233.1-201ENST00000422812 283 ntBASIC6.06□□□□□ -1.44
CD40P25942 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 AC018804.1-201ENST00000430381 618 ntBASIC6.06□□□□□ -1.44
CD40P25942 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 FTH1P16-201ENST00000435241 552 ntBASIC6.06□□□□□ -1.44
CD40P25942 OR51P1P-201ENST00000447547 942 ntBASIC6.06□□□□□ -1.44
CD40P25942 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.06□□□□□ -1.44
CD40P25942 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.06□□□□□ -1.44
CD40P25942 ANKRD26P4-201ENST00000455755 950 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC010878.1-201ENST00000456500 1047 ntBASIC6.06□□□□□ -1.44
CD40P25942 AL096803.1-201ENST00000456921 1021 ntBASIC6.06□□□□□ -1.44
CD40P25942 RPSAP24-201ENST00000461543 873 ntBASIC6.06□□□□□ -1.44
CD40P25942 AP000805.1-201ENST00000471604 784 ntBASIC6.06□□□□□ -1.44
CD40P25942 RPF2P2-201ENST00000504693 896 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC104108.1-201ENST00000509930 412 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.06□□□□□ -1.44
CD40P25942 NDUFB4P12-201ENST00000513465 390 ntBASIC6.06□□□□□ -1.44
CD40P25942 SEPT10P1-201ENST00000517342 1162 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.06□□□□□ -1.44
CD40P25942 AC131935.1-201ENST00000524621 333 ntBASIC6.06□□□□□ -1.44
CD40P25942 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.06□□□□□ -1.44
CD40P25942 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.06□□□□□ -1.44
CD40P25942 AADACP1-206ENST00000561502 1193 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.06□□□□□ -1.44
CD40P25942 AC027796.1-201ENST00000575593 512 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 AP005136.1-201ENST00000579765 429 ntBASIC6.06□□□□□ -1.44
CD40P25942 MIR4312-201ENST00000579909 76 ntBASIC6.06□□□□□ -1.44
CD40P25942 IGLJCOR18-201ENST00000584002 424 ntBASIC6.06□□□□□ -1.44
CD40P25942 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 AC125494.3-201ENST00000602759 455 ntBASIC6.06□□□□□ -1.44
CD40P25942 AL450489.1-201ENST00000612071 468 ntBASIC6.06□□□□□ -1.44
CD40P25942 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 STMN1P1-201ENST00000617809 440 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC005899.6-201ENST00000620729 297 ntBASIC6.06□□□□□ -1.44
CD40P25942 AC024595.1-201ENST00000623088 387 ntBASIC6.06□□□□□ -1.44
CD40P25942 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.06□□□□□ -1.44
CD40P25942 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.06□□□□□ -1.44
CD40P25942 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.06□□□□□ -1.44
CD40P25942 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CD40P25942 TRIM53CP-201ENST00000531490 1354 ntBASIC6.06□□□□□ -1.44
CD40P25942 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.05□□□□□ -1.44
CD40P25942 AC116158.1-201ENST00000560231 2129 ntBASIC6.05□□□□□ -1.44
CD40P25942 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 AC102941.1-201ENST00000567616 1537 ntBASIC6.05□□□□□ -1.44
CD40P25942 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 AC138393.1-206ENST00000540997 1886 ntBASIC6.05□□□□□ -1.44
CD40P25942 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC6.05□□□□□ -1.44
CD40P25942 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CD40P25942 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 RN7SKP118-201ENST00000364331 330 ntBASIC6.05□□□□□ -1.44
CD40P25942 RNA5SP172-201ENST00000365061 118 ntBASIC6.05□□□□□ -1.44
CD40P25942 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.05□□□□□ -1.44
CD40P25942 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CD40P25942 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.05□□□□□ -1.44
CD40P25942 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.05□□□□□ -1.44
CD40P25942 RPLP1P10-201ENST00000413972 339 ntBASIC6.05□□□□□ -1.44
CD40P25942 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.05□□□□□ -1.44
CD40P25942 PRUNEP1-201ENST00000425846 705 ntBASIC6.05□□□□□ -1.44
CD40P25942 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.05□□□□□ -1.44
CD40P25942 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.05□□□□□ -1.44
CD40P25942 RPL3P11-201ENST00000434028 1146 ntBASIC6.05□□□□□ -1.44
CD40P25942 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.05□□□□□ -1.44
CD40P25942 ARL5AP2-201ENST00000444698 533 ntBASIC6.05□□□□□ -1.44
CD40P25942 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.05□□□□□ -1.44
CD40P25942 PPIAP32-201ENST00000449940 472 ntBASIC6.05□□□□□ -1.44
CD40P25942 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.05□□□□□ -1.44
CD40P25942 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.05□□□□□ -1.44
CD40P25942 AL133477.1-201ENST00000457472 514 ntBASIC6.05□□□□□ -1.44
CD40P25942 RN7SL372P-201ENST00000461982 298 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms