Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ELL2P3-201ENST00000457883 1602 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 AC011815.2-201ENST00000618230 2021 ntBASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
CSB-PGBD3P0DP91 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 CD86-209ENST00000493101 1572 ntTSL 2 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 SNORD65-201ENST00000391079 73 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 YWHAZP6-201ENST00000399764 738 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AL390023.1-201ENST00000428836 262 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 MTCYBP29-201ENST00000436327 1006 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 HMGN1P6-201ENST00000438508 291 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 MTATP6P23-201ENST00000440153 476 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 UBBP5-201ENST00000446970 266 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 TRY2P-201ENST00000448860 689 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 OR52J1P-201ENST00000450596 932 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 SCG5-207ENST00000497208 949 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AL390198.2-201ENST00000510553 222 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 OR51A1P-201ENST00000511110 946 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC023161.2-201ENST00000551218 780 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC010546.1-201ENST00000569391 485 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 APOC2-205ENST00000592257 444 ntTSL 3 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC073387.2-201ENST00000604797 784 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AL353621.2-201ENST00000605340 133 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AL021997.1-201ENST00000605757 193 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 SNORD96A-201ENST00000606577 79 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC017083.3-201ENST00000609955 700 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 RMST_5.1-201ENST00000618704 126 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 MTCO1P25-201ENST00000414449 1799 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 CA10-204ENST00000570565 2276 ntTSL 5 BASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 AC020978.8-201ENST00000571975 3022 ntBASIC9.03□□□□□ -0.96
CSB-PGBD3P0DP91 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
CSB-PGBD3P0DP91 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC9.02□□□□□ -0.96
CSB-PGBD3P0DP91 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 QRSL1P1-201ENST00000400977 1540 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 CDY11P-201ENST00000447168 1651 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 FIG4-202ENST00000368941 791 ntTSL 3 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 RN7SKP97-201ENST00000410966 333 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AL158825.1-201ENST00000414735 521 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 DEFB130D-201ENST00000426866 237 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 AC007679.3-201ENST00000434035 414 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 ARL4AP3-201ENST00000441452 574 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 NDUFAF4P2-201ENST00000445374 520 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 RPL26P30-201ENST00000453533 435 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 OFD1P7Y-201ENST00000454643 1155 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 OR2AF1P-201ENST00000454899 889 ntBASIC9.02□□□□□ -0.97
CSB-PGBD3P0DP91 SUMO1P1-201ENST00000497904 306 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms