Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC244502.2-201ENST00000543361 851 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.35□□□□□ -1.55
FREM3P0C091 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.35□□□□□ -1.55
FREM3P0C091 MIR6793-201ENST00000612376 63 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 OR11H2-202ENST00000641517 1085 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.35□□□□□ -1.55
FREM3P0C091 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.35□□□□□ -1.55
FREM3P0C091 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.35□□□□□ -1.55
FREM3P0C091 AL132875.1-201ENST00000403623 949 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 RPS3AP2-201ENST00000407190 754 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.35□□□□□ -1.55
FREM3P0C091 RPS15AP30-201ENST00000420976 390 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 HMGN1P36-201ENST00000446623 298 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 RPL31P15-201ENST00000449770 338 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC004129.2-201ENST00000457229 287 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.35□□□□□ -1.55
FREM3P0C091 AC008629.2-201ENST00000503783 483 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AL158068.1-201ENST00000506116 616 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.35□□□□□ -1.55
FREM3P0C091 AC135626.1-201ENST00000556983 435 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC018558.5-201ENST00000565840 952 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.35□□□□□ -1.55
FREM3P0C091 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
FREM3P0C091 AC015802.2-201ENST00000589690 189 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 RN7SL544P-201ENST00000617232 284 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 RN7SL763P-201ENST00000620922 284 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 AC116667.2-201ENST00000641075 823 ntBASIC5.35□□□□□ -1.55
FREM3P0C091 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FREM3P0C091 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
FREM3P0C091 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
FREM3P0C091 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.34□□□□□ -1.55
FREM3P0C091 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.34□□□□□ -1.55
FREM3P0C091 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.34□□□□□ -1.55
FREM3P0C091 AC027088.4-201ENST00000611559 1947 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 SNORD1C-201ENST00000363315 78 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.34□□□□□ -1.55
FREM3P0C091 AC245060.4-201ENST00000413293 1121 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 OR6E1P-201ENST00000414424 923 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.34□□□□□ -1.55
FREM3P0C091 SUMO2P3-201ENST00000438311 288 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 AC093166.4-201ENST00000457867 318 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 RN7SKP248-201ENST00000516278 305 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.34□□□□□ -1.55
FREM3P0C091 AL049779.3-201ENST00000557141 606 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 MIR3176-201ENST00000582210 90 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 MIR132-201ENST00000591554 101 ntBASIC5.34□□□□□ -1.55
FREM3P0C091 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.34□□□□□ -1.55
FREM3P0C091 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
FREM3P0C091 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC5.34□□□□□ -1.55
FREM3P0C091 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
FREM3P0C091 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
FREM3P0C091 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.56
FREM3P0C091 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
FREM3P0C091 AL139805.2-201ENST00000455305 2433 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
FREM3P0C091 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
FREM3P0C091 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
FREM3P0C091 AC126120.1-201ENST00000431082 470 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 H3F3BP1-201ENST00000440551 403 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AC018638.3-201ENST00000461273 132 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AC093719.1-201ENST00000480427 441 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.33□□□□□ -1.56
FREM3P0C091 RNU6-615P-201ENST00000516065 106 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.33□□□□□ -1.56
FREM3P0C091 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.33□□□□□ -1.56
FREM3P0C091 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.33□□□□□ -1.56
FREM3P0C091 AC100767.2-201ENST00000604840 693 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 AL021918.2-201ENST00000613415 194 ntBASIC5.33□□□□□ -1.56
FREM3P0C091 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.33□□□□□ -1.56
FREM3P0C091 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.33□□□□□ -1.56
FREM3P0C091 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.33□□□□□ -1.56
FREM3P0C091 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
FREM3P0C091 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
FREM3P0C091 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FREM3P0C091 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms