Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 AL049869.1-201ENST00000556933 1402 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 U3.28-201ENST00000391249 210 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 RN7SKP221-201ENST00000410420 301 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 RNU2-5P-201ENST00000410533 180 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.5□□□□□ -1.69
CXCL1P09341 CDC42P6-201ENST00000421246 576 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 GRPEL2P2-201ENST00000421856 670 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 E2F6P1-201ENST00000428850 745 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 FECHP1-201ENST00000431896 1214 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 PPIAP10-201ENST00000438675 458 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 E2F6P3-201ENST00000441743 743 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 PCMTD1P3-201ENST00000451824 472 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC245028.2-201ENST00000458673 253 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 RPS3AP49-201ENST00000472161 790 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC010409.2-201ENST00000505780 478 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC114940.1-201ENST00000512162 1265 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.5□□□□□ -1.69
CXCL1P09341 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 MIR4685-201ENST00000578185 69 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL1P09341 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC006272.2-201ENST00000594725 163 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 AP001642.1-201ENST00000624727 2117 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC073488.6-201ENST00000632293 754 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AC006453.3-201ENST00000635891 377 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL1P09341 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC005261.2-201ENST00000593427 4258 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CXCL1P09341 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL1P09341 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 AC012078.1-201ENST00000405035 1646 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 AL034549.2-201ENST00000618285 3373 ntBASIC4.5□□□□□ -1.69
CXCL1P09341 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL1P09341 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 AC000374.1-201ENST00000434698 1745 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 QRSL1P3-201ENST00000552666 1316 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 OR55B1P-203ENST00000641518 2602 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CXCL1P09341 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL1P09341 RNU1-49P-201ENST00000363468 159 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL1P09341 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.49□□□□□ -1.69
CXCL1P09341 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CXCL1P09341 RNA5SP91-201ENST00000390902 119 ntBASIC4.49□□□□□ -1.69
CXCL1P09341 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms