Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC5□□□□□ -1.61
CD74P04233 AC010487.1-201ENST00000594408 1172 ntBASIC5□□□□□ -1.61
CD74P04233 AL589743.6-201ENST00000611025 117 ntBASIC5□□□□□ -1.61
CD74P04233 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5□□□□□ -1.61
CD74P04233 AC073869.7-201ENST00000640874 297 ntBASIC5□□□□□ -1.61
CD74P04233 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD74P04233 AC020656.2-201ENST00000613291 5309 ntBASIC5□□□□□ -1.61
CD74P04233 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5□□□□□ -1.61
CD74P04233 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5□□□□□ -1.61
CD74P04233 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD74P04233 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD74P04233 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD74P04233 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD74P04233 AC015689.2-201ENST00000528172 1738 ntBASIC5□□□□□ -1.61
CD74P04233 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
CD74P04233 AC068870.3-201ENST00000625077 2536 ntBASIC4.99□□□□□ -1.61
CD74P04233 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.99□□□□□ -1.61
CD74P04233 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 OR10R3P-201ENST00000361688 942 ntBASIC4.99□□□□□ -1.61
CD74P04233 RNA5SP308-201ENST00000362532 115 ntBASIC4.99□□□□□ -1.61
CD74P04233 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.99□□□□□ -1.61
CD74P04233 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 RNA5SP91-201ENST00000390902 119 ntBASIC4.99□□□□□ -1.61
CD74P04233 AL353133.1-201ENST00000407695 401 ntBASIC4.99□□□□□ -1.61
CD74P04233 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC4.99□□□□□ -1.61
CD74P04233 RNGTTP1-201ENST00000420965 728 ntBASIC4.99□□□□□ -1.61
CD74P04233 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.99□□□□□ -1.61
CD74P04233 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.99□□□□□ -1.61
CD74P04233 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.99□□□□□ -1.61
CD74P04233 AL133351.3-201ENST00000454998 193 ntBASIC4.99□□□□□ -1.61
CD74P04233 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 AC096661.1-201ENST00000515870 822 ntBASIC4.99□□□□□ -1.61
CD74P04233 RNU6-964P-201ENST00000516524 69 ntBASIC4.99□□□□□ -1.61
CD74P04233 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.99□□□□□ -1.61
CD74P04233 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.99□□□□□ -1.61
CD74P04233 RPL41P2-201ENST00000544920 409 ntBASIC4.99□□□□□ -1.61
CD74P04233 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 ARGFXP2-201ENST00000579304 949 ntBASIC4.99□□□□□ -1.61
CD74P04233 AC100832.2-201ENST00000582080 776 ntBASIC4.99□□□□□ -1.61
CD74P04233 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
CD74P04233 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 HIRAP1-201ENST00000605318 787 ntBASIC4.99□□□□□ -1.61
CD74P04233 NANOGP3-201ENST00000605855 286 ntBASIC4.99□□□□□ -1.61
CD74P04233 AL353729.2-201ENST00000605859 1249 ntBASIC4.99□□□□□ -1.61
CD74P04233 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
CD74P04233 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.99□□□□□ -1.61
CD74P04233 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CD74P04233 PARP4P2-201ENST00000446672 3326 ntBASIC4.99□□□□□ -1.61
CD74P04233 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CD74P04233 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CD74P04233 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CD74P04233 AC097063.1-201ENST00000426714 1797 ntBASIC4.99□□□□□ -1.61
CD74P04233 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CD74P04233 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.98□□□□□ -1.61
CD74P04233 RNU1-136P-201ENST00000384181 164 ntBASIC4.98□□□□□ -1.61
CD74P04233 GPS2P1-201ENST00000411761 986 ntBASIC4.98□□□□□ -1.61
CD74P04233 AL445213.1-201ENST00000412589 747 ntBASIC4.98□□□□□ -1.61
CD74P04233 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.98□□□□□ -1.61
CD74P04233 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CD74P04233 GTF3AP6-201ENST00000432585 986 ntBASIC4.98□□□□□ -1.61
CD74P04233 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.98□□□□□ -1.61
CD74P04233 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.98□□□□□ -1.61
CD74P04233 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.98□□□□□ -1.61
CD74P04233 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 POU5F1P5-201ENST00000445059 658 ntBASIC4.98□□□□□ -1.61
CD74P04233 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 CEACAMP11-201ENST00000455211 583 ntBASIC4.98□□□□□ -1.61
CD74P04233 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC4.98□□□□□ -1.61
CD74P04233 AC006539.1-201ENST00000481419 501 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms