Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 RNA5SP394-201ENST00000364216 119 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AL596448.1-201ENST00000415024 392 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC5.47□□□□□ -1.53
SPTA1P02549 AC005033.1-201ENST00000428904 813 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.47□□□□□ -1.53
SPTA1P02549 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 AC068587.1-201ENST00000483613 781 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AC091965.3-201ENST00000506236 208 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AC100784.1-201ENST00000522790 310 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.47□□□□□ -1.53
SPTA1P02549 MIR4480-201ENST00000582492 71 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 MIR6085-201ENST00000618314 110 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 AL357562.1-201ENST00000624911 609 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.47□□□□□ -1.53
SPTA1P02549 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SPTA1P02549 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
SPTA1P02549 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SPTA1P02549 FO082842.1-201ENST00000423552 1370 ntBASIC5.47□□□□□ -1.53
SPTA1P02549 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SPTA1P02549 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SPTA1P02549 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
SPTA1P02549 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.46□□□□□ -1.53
SPTA1P02549 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
SPTA1P02549 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
SPTA1P02549 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
SPTA1P02549 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.46□□□□□ -1.53
SPTA1P02549 CYP4F32P-201ENST00000426492 504 ntBASIC5.46□□□□□ -1.53
SPTA1P02549 RN7SL72P-201ENST00000460697 269 ntBASIC5.46□□□□□ -1.53
SPTA1P02549 RN7SL346P-201ENST00000491561 294 ntBASIC5.46□□□□□ -1.53
SPTA1P02549 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.46□□□□□ -1.53
SPTA1P02549 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SPTA1P02549 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.46□□□□□ -1.53
SPTA1P02549 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.46□□□□□ -1.53
SPTA1P02549 AC018558.5-201ENST00000565840 952 ntBASIC5.46□□□□□ -1.53
SPTA1P02549 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.46□□□□□ -1.53
SPTA1P02549 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.46□□□□□ -1.53
SPTA1P02549 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.46□□□□□ -1.53
SPTA1P02549 AC009704.2-201ENST00000618739 483 ntBASIC5.46□□□□□ -1.53
SPTA1P02549 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
SPTA1P02549 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.46□□□□□ -1.54
SPTA1P02549 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
SPTA1P02549 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.46□□□□□ -1.54
SPTA1P02549 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SPTA1P02549 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SPTA1P02549 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SPTA1P02549 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
SPTA1P02549 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC5.46□□□□□ -1.54
SPTA1P02549 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
SPTA1P02549 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SPTA1P02549 AC012618.3-205ENST00000637896 1496 ntBASIC5.46□□□□□ -1.54
SPTA1P02549 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SPTA1P02549 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SPTA1P02549 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.46□□□□□ -1.54
SPTA1P02549 RPL36P18-201ENST00000419316 318 ntBASIC5.46□□□□□ -1.54
SPTA1P02549 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.46□□□□□ -1.54
SPTA1P02549 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.46□□□□□ -1.54
SPTA1P02549 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.46□□□□□ -1.54
SPTA1P02549 AL122020.1-201ENST00000472287 459 ntBASIC5.46□□□□□ -1.54
SPTA1P02549 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.46□□□□□ -1.54
SPTA1P02549 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC5.46□□□□□ -1.54
SPTA1P02549 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.46□□□□□ -1.54
SPTA1P02549 AC136624.4-201ENST00000573044 370 ntBASIC5.46□□□□□ -1.54
SPTA1P02549 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.46□□□□□ -1.54
SPTA1P02549 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC5.46□□□□□ -1.54
SPTA1P02549 AL359513.1-201ENST00000614364 557 ntBASIC5.46□□□□□ -1.54
SPTA1P02549 MIR6837-201ENST00000620884 64 ntBASIC5.46□□□□□ -1.54
SPTA1P02549 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
SPTA1P02549 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SPTA1P02549 AC012360.3-201ENST00000610036 3449 ntBASIC5.46□□□□□ -1.54
SPTA1P02549 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
SPTA1P02549 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
SPTA1P02549 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.46□□□□□ -1.54
SPTA1P02549 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SPTA1P02549 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 PRELID1P2-201ENST00000407805 396 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.45□□□□□ -1.54
SPTA1P02549 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SPTA1P02549 RN7SKP166-201ENST00000410812 305 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.45□□□□□ -1.54
SPTA1P02549 AC012519.1-201ENST00000424588 610 ntBASIC5.45□□□□□ -1.54
SPTA1P02549 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.45□□□□□ -1.54
SPTA1P02549 RPL23AP68-201ENST00000480924 445 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms