Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HLA-DQA2P01906 AC004656.1-201ENST00000568479 4951 ntBASIC5.62□□□□□ -1.51
HLA-DQA2P01906 AC003985.2-201ENST00000562268 1669 ntBASIC5.62□□□□□ -1.51
HLA-DQA2P01906 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HLA-DQA2P01906 AC119674.1-202ENST00000641333 1860 ntBASIC5.62□□□□□ -1.51
HLA-DQA2P01906 AOX3P-204ENST00000491025 2107 ntBASIC5.62□□□□□ -1.51
HLA-DQA2P01906 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.62□□□□□ -1.51
HLA-DQA2P01906 CCDC150P1-201ENST00000537123 2215 ntBASIC5.62□□□□□ -1.51
HLA-DQA2P01906 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.62□□□□□ -1.51
HLA-DQA2P01906 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HLA-DQA2P01906 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 MAPK10-287ENST00000641217 3037 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC010132.2-201ENST00000295493 1043 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC010894.1-201ENST00000313760 361 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 OR56A4-201ENST00000330728 1209 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 SNORA72.3-201ENST00000365074 132 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 RNU1-84P-201ENST00000365447 164 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 CBX1P3-201ENST00000413296 527 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 MEAF6P1-201ENST00000416092 327 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC006509.1-201ENST00000420788 634 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 SFR1P2-201ENST00000421841 730 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AL512637.2-201ENST00000431287 1256 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 TVP23BP2-201ENST00000455082 615 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 MTATP6P14-201ENST00000455189 673 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 RPEP1-201ENST00000504507 658 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AP004607.5-201ENST00000532034 217 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 SLC25A51P2-201ENST00000535708 889 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC023158.1-201ENST00000561632 1025 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC090220.1-201ENST00000593078 1699 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC036176.3-201ENST00000602456 418 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AL021368.3-201ENST00000607119 578 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC006924.1-201ENST00000610750 559 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AC010608.3-201ENST00000625048 527 ntBASIC5.61□□□□□ -1.51
HLA-DQA2P01906 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.61□□□□□ -1.51
HLA-DQA2P01906 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 AC093909.5-201ENST00000621839 1799 ntBASIC5.6□□□□□ -1.51
HLA-DQA2P01906 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 CCNT2P1-201ENST00000423082 1315 ntBASIC5.6□□□□□ -1.51
HLA-DQA2P01906 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 AL451142.1-201ENST00000375867 775 ntBASIC5.6□□□□□ -1.51
HLA-DQA2P01906 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HLA-DQA2P01906 GSTA12P-201ENST00000402398 508 ntBASIC5.6□□□□□ -1.51
HLA-DQA2P01906 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms