Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.96□□□□□ -1.46
LDLRP01130 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.96□□□□□ -1.46
LDLRP01130 RPL12P12-201ENST00000424633 501 ntBASIC5.96□□□□□ -1.46
LDLRP01130 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.96□□□□□ -1.46
LDLRP01130 TRGV7-201ENST00000427089 353 ntBASIC5.96□□□□□ -1.46
LDLRP01130 BX119904.3-201ENST00000428194 957 ntBASIC5.96□□□□□ -1.46
LDLRP01130 AC013410.1-201ENST00000436223 1232 ntBASIC5.96□□□□□ -1.46
LDLRP01130 AC009963.3-201ENST00000458090 486 ntBASIC5.96□□□□□ -1.46
LDLRP01130 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.96□□□□□ -1.46
LDLRP01130 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.96□□□□□ -1.46
LDLRP01130 RN7SL174P-201ENST00000475578 289 ntBASIC5.96□□□□□ -1.46
LDLRP01130 RPS26P24-201ENST00000497656 331 ntBASIC5.96□□□□□ -1.46
LDLRP01130 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.96□□□□□ -1.46
LDLRP01130 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.96□□□□□ -1.46
LDLRP01130 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.96□□□□□ -1.46
LDLRP01130 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.96□□□□□ -1.46
LDLRP01130 RNU6-362P-201ENST00000516736 90 ntBASIC5.96□□□□□ -1.46
LDLRP01130 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.96□□□□□ -1.46
LDLRP01130 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.96□□□□□ -1.46
LDLRP01130 AC009120.3-201ENST00000563335 499 ntBASIC5.96□□□□□ -1.46
LDLRP01130 AC092718.4-201ENST00000566639 716 ntBASIC5.96□□□□□ -1.46
LDLRP01130 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.96□□□□□ -1.46
LDLRP01130 AP000919.1-201ENST00000582850 985 ntBASIC5.96□□□□□ -1.46
LDLRP01130 AC026898.1-201ENST00000586404 571 ntBASIC5.96□□□□□ -1.46
LDLRP01130 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.96□□□□□ -1.46
LDLRP01130 AP001437.1-201ENST00000608783 456 ntBASIC5.96□□□□□ -1.46
LDLRP01130 AL031658.2-201ENST00000616850 651 ntBASIC5.96□□□□□ -1.46
LDLRP01130 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.96□□□□□ -1.46
LDLRP01130 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.96□□□□□ -1.46
LDLRP01130 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.96□□□□□ -1.46
LDLRP01130 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
LDLRP01130 CIR1P2-201ENST00000514821 1342 ntBASIC5.96□□□□□ -1.46
LDLRP01130 PSMC1P4-201ENST00000515236 1327 ntBASIC5.96□□□□□ -1.46
LDLRP01130 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.96□□□□□ -1.46
LDLRP01130 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
LDLRP01130 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LDLRP01130 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LDLRP01130 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LDLRP01130 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 TRAV35-201ENST00000390462 330 ntBASIC5.95□□□□□ -1.46
LDLRP01130 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 AC015977.1-201ENST00000418887 292 ntBASIC5.95□□□□□ -1.46
LDLRP01130 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 NPM1P48-201ENST00000436002 853 ntBASIC5.95□□□□□ -1.46
LDLRP01130 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 AL020997.1-201ENST00000446554 349 ntBASIC5.95□□□□□ -1.46
LDLRP01130 COX4I1P2-201ENST00000447446 547 ntBASIC5.95□□□□□ -1.46
LDLRP01130 OR52I1-201ENST00000450052 1050 ntBASIC5.95□□□□□ -1.46
LDLRP01130 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.95□□□□□ -1.46
LDLRP01130 AP002371.1-201ENST00000463604 433 ntBASIC5.95□□□□□ -1.46
LDLRP01130 RN7SL177P-201ENST00000476596 299 ntBASIC5.95□□□□□ -1.46
LDLRP01130 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 AC008945.1-201ENST00000505144 499 ntBASIC5.95□□□□□ -1.46
LDLRP01130 MTATP6P1-201ENST00000514057 681 ntBASIC5.95□□□□□ -1.46
LDLRP01130 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.95□□□□□ -1.46
LDLRP01130 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.95□□□□□ -1.46
LDLRP01130 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.95□□□□□ -1.46
LDLRP01130 NPIPB14P-203ENST00000532298 987 ntBASIC5.95□□□□□ -1.46
LDLRP01130 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LDLRP01130 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 AC005632.2-201ENST00000564271 828 ntBASIC5.95□□□□□ -1.46
LDLRP01130 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.95□□□□□ -1.46
LDLRP01130 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 RN7SL208P-201ENST00000577964 296 ntBASIC5.95□□□□□ -1.46
LDLRP01130 MIR3189-201ENST00000578735 73 ntBASIC5.95□□□□□ -1.46
LDLRP01130 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.95□□□□□ -1.46
LDLRP01130 AL589863.1-201ENST00000595383 631 ntBASIC5.95□□□□□ -1.46
LDLRP01130 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.95□□□□□ -1.46
LDLRP01130 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.95□□□□□ -1.46
LDLRP01130 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
LDLRP01130 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
LDLRP01130 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms