Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFBP01127 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFBP01127 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFBP01127 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFBP01127 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PDGFBP01127 SNORA43.1-201ENST00000364863 140 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 AC005042.1-201ENST00000393397 800 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 AC096537.2-201ENST00000413707 714 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 CNOT7P2-201ENST00000441051 832 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 RPL35AP19-201ENST00000469425 329 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 OR2AO1P-201ENST00000476497 403 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 RPS4XP1-201ENST00000482189 787 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 GOLGA5P1-201ENST00000507317 980 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 AC253576.1-201ENST00000511645 1156 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFBP01127 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFBP01127 MIR3691-201ENST00000578066 90 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFBP01127 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFBP01127 AC008115.4-201ENST00000619780 775 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 AC073342.3-201ENST00000624211 193 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 OR7A1P-202ENST00000641542 1158 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
PDGFBP01127 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFBP01127 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 NEK2P4-201ENST00000425793 1329 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 AL512310.3-201ENST00000547023 1335 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PDGFBP01127 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PDGFBP01127 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PDGFBP01127 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.14□□□□□ -1.43
PDGFBP01127 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.14□□□□□ -1.43
PDGFBP01127 AC062022.1-201ENST00000451026 1684 ntBASIC6.14□□□□□ -1.43
PDGFBP01127 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFBP01127 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 AL157831.2-201ENST00000564681 3095 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PDGFBP01127 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PDGFBP01127 MIR550A3-201ENST00000390735 95 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 RN7SKP273-201ENST00000411392 314 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 RBMY2KP-201ENST00000418221 992 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFBP01127 HMGB3P24-201ENST00000433260 622 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFBP01127 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFBP01127 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFBP01127 ST13P12-201ENST00000508958 1094 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
PDGFBP01127 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFBP01127 AC092375.1-201ENST00000550410 637 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 AC004825.1-201ENST00000555068 586 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 AC023389.2-201ENST00000580031 955 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 AC096861.1-201ENST00000616652 240 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 AC005840.5-201ENST00000619166 599 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFBP01127 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PDGFBP01127 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.13□□□□□ -1.43
PDGFBP01127 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.13□□□□□ -1.43
PDGFBP01127 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
PDGFBP01127 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.13□□□□□ -1.43
PDGFBP01127 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
PDGFBP01127 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PDGFBP01127 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.13□□□□□ -1.43
PDGFBP01127 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PDGFBP01127 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFBP01127 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
PDGFBP01127 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
PDGFBP01127 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
PDGFBP01127 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 SELENOWP1-201ENST00000322792 252 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFBP01127 RNA5SP375-201ENST00000362975 119 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms