Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SEPT14P12-201ENST00000442280 560 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 ZNF619P1-201ENST00000446539 752 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.98□□□□□ -1.61
SDCBPO00560 PFN1P6-201ENST00000476786 399 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.98□□□□□ -1.61
SDCBPO00560 MAST4-IT1-201ENST00000514241 658 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 RNA5SP434-201ENST00000516647 121 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 AC130365.2-201ENST00000525882 1201 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 OR8Q1P-201ENST00000526467 655 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.98□□□□□ -1.61
SDCBPO00560 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.98□□□□□ -1.61
SDCBPO00560 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.98□□□□□ -1.61
SDCBPO00560 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.98□□□□□ -1.61
SDCBPO00560 MRPS21P8-201ENST00000569196 235 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 AL078601.3-201ENST00000573303 535 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 MIR744-201ENST00000578242 98 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.98□□□□□ -1.61
SDCBPO00560 AL645933.2-201ENST00000606743 1207 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.98□□□□□ -1.61
SDCBPO00560 PPBPP2-201ENST00000513150 1362 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
SDCBPO00560 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
SDCBPO00560 NLRP3P1-201ENST00000622303 1785 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.98□□□□□ -1.61
SDCBPO00560 AL022311.1-201ENST00000623726 19416 ntBASIC4.98□□□□□ -1.61
SDCBPO00560 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SDCBPO00560 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SDCBPO00560 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SDCBPO00560 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 MTCO1P28-201ENST00000574177 1528 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.97□□□□□ -1.61
SDCBPO00560 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SDCBPO00560 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.97□□□□□ -1.61
SDCBPO00560 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 SNORA21-201ENST00000362423 132 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 RNU1-134P-201ENST00000362935 165 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AC087752.1-201ENST00000391360 558 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.97□□□□□ -1.61
SDCBPO00560 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.97□□□□□ -1.61
SDCBPO00560 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 NME1P1-201ENST00000420914 382 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 NMD3P2-201ENST00000421815 761 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.97□□□□□ -1.61
SDCBPO00560 AL139158.1-201ENST00000424719 340 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 CRIP1P1-201ENST00000427567 185 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.97□□□□□ -1.61
SDCBPO00560 AC099670.2-201ENST00000435130 321 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.97□□□□□ -1.61
SDCBPO00560 AC010240.2-201ENST00000445363 1205 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.97□□□□□ -1.61
SDCBPO00560 RN7SL254P-201ENST00000460609 284 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.97□□□□□ -1.61
SDCBPO00560 CR383656.1-201ENST00000484916 377 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 PDCL3P4-201ENST00000489621 720 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 RN7SL362P-201ENST00000494228 267 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 HMGN1P17-201ENST00000513734 295 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 CR383658.1-201ENST00000514609 734 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.97□□□□□ -1.61
SDCBPO00560 AC116917.1-201ENST00000520558 305 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AC036111.2-201ENST00000533247 901 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.97□□□□□ -1.61
SDCBPO00560 AC126615.2-201ENST00000553003 515 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.97□□□□□ -1.61
SDCBPO00560 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.97□□□□□ -1.61
SDCBPO00560 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 AC006115.2-201ENST00000596823 202 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
SDCBPO00560 AL513327.3-201ENST00000602618 469 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 uc_338.29-201ENST00000615099 168 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 HTR1DP1-201ENST00000616500 888 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AC096708.4-201ENST00000620563 552 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 AL109924.4-201ENST00000623089 670 ntBASIC4.97□□□□□ -1.61
SDCBPO00560 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SDCBPO00560 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SDCBPO00560 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SDCBPO00560 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
SDCBPO00560 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms