Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC130360.2-201ENST00000533477 1556 ntBASIC5.59□□□□□ -1.52
UPK1AO00322 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.59□□□□□ -1.52
UPK1AO00322 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
UPK1AO00322 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
UPK1AO00322 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 AL354854.1-201ENST00000455940 1363 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.58□□□□□ -1.52
UPK1AO00322 SSXP3-201ENST00000442971 1300 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 GNL2P1-201ENST00000451274 2190 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.58□□□□□ -1.52
UPK1AO00322 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.58□□□□□ -1.52
UPK1AO00322 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.58□□□□□ -1.52
UPK1AO00322 SNORA51.9-201ENST00000384295 124 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 SNRPEP6-201ENST00000407465 277 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 MIR1275-201ENST00000408770 80 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.58□□□□□ -1.52
UPK1AO00322 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.58□□□□□ -1.52
UPK1AO00322 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.58□□□□□ -1.52
UPK1AO00322 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.58□□□□□ -1.52
UPK1AO00322 PNKDP1-201ENST00000435914 430 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 MTND2P40-201ENST00000436718 841 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 AC005165.2-201ENST00000466070 380 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 CR383656.1-201ENST00000484916 377 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.58□□□□□ -1.52
UPK1AO00322 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.58□□□□□ -1.52
UPK1AO00322 AL158068.1-201ENST00000506116 616 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
UPK1AO00322 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.58□□□□□ -1.52
UPK1AO00322 RN7SKP183-201ENST00000517169 324 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.58□□□□□ -1.52
UPK1AO00322 OR7E158P-201ENST00000524483 910 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.58□□□□□ -1.52
UPK1AO00322 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.58□□□□□ -1.52
UPK1AO00322 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
UPK1AO00322 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.58□□□□□ -1.52
UPK1AO00322 AC004801.6-201ENST00000616571 978 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
UPK1AO00322 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
UPK1AO00322 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
UPK1AO00322 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
UPK1AO00322 PSG10P-201ENST00000501199 1500 ntBASIC5.58□□□□□ -1.52
UPK1AO00322 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
UPK1AO00322 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPK1AO00322 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UPK1AO00322 RBPJP7-201ENST00000442803 1447 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 RBPJP5-201ENST00000449433 1447 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
UPK1AO00322 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UPK1AO00322 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.57□□□□□ -1.52
UPK1AO00322 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UPK1AO00322 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UPK1AO00322 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPK1AO00322 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.57□□□□□ -1.52
UPK1AO00322 RNA5SP211-201ENST00000365516 117 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
UPK1AO00322 MIR130B-202ENST00000385018 82 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 MRPS21P2-201ENST00000424704 264 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AC099677.3-201ENST00000427081 395 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AC242426.1-201ENST00000435270 960 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 RPS7P3-201ENST00000443360 580 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 MED28P3-201ENST00000444288 531 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AC073072.2-201ENST00000447425 348 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AL445466.1-201ENST00000448432 357 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AC093166.3-201ENST00000448785 303 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UPK1AO00322 AC104339.1-201ENST00000465478 348 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.57□□□□□ -1.52
UPK1AO00322 IGKV3D-25-201ENST00000519599 235 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.57□□□□□ -1.52
UPK1AO00322 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.57□□□□□ -1.52
UPK1AO00322 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.57□□□□□ -1.52
UPK1AO00322 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.57□□□□□ -1.52
UPK1AO00322 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPK1AO00322 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.57□□□□□ -1.52
UPK1AO00322 AP005119.1-201ENST00000580956 292 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.57□□□□□ -1.52
UPK1AO00322 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.57□□□□□ -1.52
UPK1AO00322 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
UPK1AO00322 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPK1AO00322 MIR6806-201ENST00000622141 64 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AL683826.1-201ENST00000624104 627 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.57□□□□□ -1.52
UPK1AO00322 AC089998.1-201ENST00000548575 3141 ntBASIC5.57□□□□□ -1.52
UPK1AO00322 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.57□□□□□ -1.52
UPK1AO00322 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UPK1AO00322 AL034546.1-201ENST00000623740 3693 ntBASIC5.56□□□□□ -1.52
UPK1AO00322 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms