Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC188H7C350 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC188H7C350 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC188H7C350 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC188H7C350 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 MTND2P12-201ENST00000417560 1252 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC188H7C350 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC188H7C350 MTND2P40-201ENST00000436718 841 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.15□□□□□ -1.42
CCDC188H7C350 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AC234771.4-201ENST00000441416 730 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 FCF1P7-201ENST00000451185 558 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 RPS7P11-201ENST00000484240 586 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 CR383656.1-201ENST00000484916 377 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
CCDC188H7C350 MIR2117-201ENST00000516780 80 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AC025423.2-201ENST00000537570 439 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.15□□□□□ -1.42
CCDC188H7C350 OR7E19P-202ENST00000589942 844 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 HIRAP1-201ENST00000605318 787 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 AL645933.2-201ENST00000606743 1207 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 AL356752.1-201ENST00000615844 593 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 AC005899.7-201ENST00000618199 588 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCDC188H7C350 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.15□□□□□ -1.42
CCDC188H7C350 AL513548.1-201ENST00000562904 1724 ntBASIC6.15□□□□□ -1.42
CCDC188H7C350 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC188H7C350 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC188H7C350 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC188H7C350 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC188H7C350 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.15□□□□□ -1.43
CCDC188H7C350 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.15□□□□□ -1.43
CCDC188H7C350 RBMY1HP-201ENST00000382759 1389 ntBASIC6.15□□□□□ -1.43
CCDC188H7C350 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC188H7C350 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCDC188H7C350 AC109446.4-201ENST00000623235 2755 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
CCDC188H7C350 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC188H7C350 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CCDC188H7C350 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
CCDC188H7C350 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 AC093671.1-201ENST00000624981 2929 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC188H7C350 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC188H7C350 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC188H7C350 RN7SKP78-201ENST00000364711 318 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 MIR138-2-201ENST00000384916 84 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC188H7C350 VN1R21P-201ENST00000426703 765 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC188H7C350 MED28P3-201ENST00000444288 531 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 AP003385.3-201ENST00000472498 287 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC188H7C350 DEFB109A-201ENST00000482450 265 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC188H7C350 SETP21-201ENST00000514799 892 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 GAPDHP62-201ENST00000515313 990 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 AC021146.10-201ENST00000515628 706 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC188H7C350 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC188H7C350 TDGP1-201ENST00000543961 1229 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.14□□□□□ -1.43
CCDC188H7C350 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC188H7C350 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC036176.3-201ENST00000602456 418 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AL353729.2-201ENST00000605859 1249 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AC068726.1-201ENST00000610993 341 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCDC188H7C350 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 FBXL21-201ENST00000297158 1305 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.14□□□□□ -1.43
CCDC188H7C350 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms