Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 ILF2P2-201ENST00000547482 1117 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL163153.1-201ENST00000554223 283 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 ZNF322P1-201ENST00000568013 1209 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RN7SL118P-201ENST00000580570 302 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC112187.2-201ENST00000604345 283 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 BX323046.1-201ENST00000610145 535 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AL355987.5-201ENST00000621585 411 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC010223.1-201ENST00000625092 279 ntBASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
VPS9D1Q9Y2B5 SLFN12-206ENST00000452764 2423 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC093768.1-201ENST00000505987 2173 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 CUL4AP1-201ENST00000514750 1863 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 Y_RNA.159-201ENST00000363674 87 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 SNORA69-201ENST00000383895 132 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 FTH1P3-201ENST00000394290 584 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 ARF1P1-201ENST00000406466 544 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC009319.1-201ENST00000411493 754 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 SNRPGP11-201ENST00000411777 232 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC010385.1-201ENST00000412374 256 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 NDUFB4P5-201ENST00000415445 361 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 LINC01347-201ENST00000417964 355 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC116050.1-206ENST00000423774 213 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AL049734.2-201ENST00000441066 616 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC012512.1-201ENST00000446594 718 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 GRPEL2P3-201ENST00000448626 640 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 CALM1P2-201ENST00000452941 448 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 RN7SL554P-201ENST00000468197 292 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 RN7SL573P-201ENST00000485340 276 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 RPS3AP50-201ENST00000487064 803 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC068781.1-201ENST00000488231 618 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 GAPDHP47-201ENST00000489113 999 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 VN1R104P-201ENST00000505115 1009 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC112184.1-201ENST00000505179 312 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 Y_RNA.672-201ENST00000516289 104 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 RNU6-445P-201ENST00000516949 107 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 COPS8P3-201ENST00000526024 482 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 ASB8-211ENST00000539528 839 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC015908.3-201ENST00000579529 667 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC090236.2-201ENST00000587933 1101 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AL645949.1-202ENST00000600073 242 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC174071.1-201ENST00000603069 517 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC019322.2-201ENST00000605634 147 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC002059.1-201ENST00000608014 477 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC092650.2-201ENST00000619984 902 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC091953.4-201ENST00000625179 341 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 CLUHP10-201ENST00000631979 980 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms