Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNA5SP238-201ENST00000365464 120 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 CNN3P1-201ENST00000401596 935 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 RNU6-564P-201ENST00000410983 104 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC012519.1-201ENST00000424588 610 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL354794.2-201ENST00000424795 1248 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 FTH1P10-202ENST00000430907 550 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL365220.1-201ENST00000432923 399 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 GOT2P2-201ENST00000450663 1251 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC063955.1-201ENST00000462872 685 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 RN7SL392P-201ENST00000473024 299 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 RN7SL790P-201ENST00000474043 298 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 RPL21P131-201ENST00000497298 483 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 PPM1AP1-201ENST00000502740 1135 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC091874.2-201ENST00000505889 720 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC008885.2-201ENST00000509506 930 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 MTND3P22-201ENST00000510932 243 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL512605.2-201ENST00000592972 256 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC090181.2-201ENST00000602975 672 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC119501.1-201ENST00000603646 475 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC010680.3-201ENST00000604215 520 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC131902.3-201ENST00000611767 581 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 UBE2Q2P2-203ENST00000613592 761 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 TSHZ2-205ENST00000626626 670 ntBASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
PDZRN3Q9UPQ7 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AP002364.1-201ENST00000623330 3386 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 RNY4P24-201ENST00000362735 96 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC134879.1-201ENST00000426062 394 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AL593851.1-201ENST00000426171 157 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 MTCO3P18-201ENST00000440206 761 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AL662791.1-201ENST00000441992 928 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 FUNDC2P2-202ENST00000443452 493 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 DBIL5P2-201ENST00000443827 253 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 WDR82P2-201ENST00000444540 928 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 MRPL42P4-201ENST00000453267 443 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC091951.2-201ENST00000500762 203 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 NPY6R-201ENST00000503807 1112 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 NACAP5-201ENST00000509863 636 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 RNU6-1045P-201ENST00000516321 107 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 OR6M3P-201ENST00000531567 700 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AL121766.1-201ENST00000547436 487 ntBASIC9.31□□□□□ -0.92
PDZRN3Q9UPQ7 AC089984.3-201ENST00000552838 363 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms