Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 VN1R20P-201ENST00000425215 966 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 GAPDHP75-201ENST00000433910 943 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 RPEP4-201ENST00000437636 602 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AC245291.3-201ENST00000443400 292 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 H3F3AP5-201ENST00000475267 429 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AC110056.1-201ENST00000525759 911 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AC011891.2-201ENST00000604949 397 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 AC015712.7-201ENST00000615211 635 ntBASIC5.56□□□□□ -1.52
VAPAQ9P0L0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
VAPAQ9P0L0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 UGT2B24P-201ENST00000514441 1597 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC109446.4-201ENST00000623235 2755 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 RNU1-134P-201ENST00000362935 165 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 RNA5SP91-201ENST00000390902 119 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 RPL11P3-201ENST00000395256 523 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 RNA5SP198-201ENST00000410376 127 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC130360.1-201ENST00000425489 1117 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AL445928.1-201ENST00000435545 222 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 RPS23P9-201ENST00000448848 438 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 RPS4XP17-201ENST00000479057 754 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC008629.2-201ENST00000503783 483 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 HMGN1P16-201ENST00000508308 283 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC130365.2-201ENST00000525882 1201 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 NPM1P5-201ENST00000557228 838 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AL512652.1-201ENST00000619006 500 ntBASIC5.55□□□□□ -1.52
VAPAQ9P0L0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.55□□□□□ -1.52
VAPAQ9P0L0 AC099654.3-201ENST00000447087 1546 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AL158827.1-201ENST00000416300 391 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 RPS4XP5-201ENST00000419038 768 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 REREP1Y-201ENST00000422655 198 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 REREP2Y-201ENST00000439103 200 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 PA2G4P1-201ENST00000442248 1197 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 TRIM60P16-201ENST00000444048 694 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 AC097486.1-201ENST00000515331 210 ntBASIC5.54□□□□□ -1.52
VAPAQ9P0L0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.54□□□□□ -1.52
VAPAQ9P0L0 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms