Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
GAFA1Q96PS6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GAFA1Q96PS6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GAFA1Q96PS6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GAFA1Q96PS6 PDZK1P1-202ENST00000425209 1350 ntBASIC4.89□□□□□ -1.63
GAFA1Q96PS6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GAFA1Q96PS6 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.89□□□□□ -1.63
GAFA1Q96PS6 DNM1P47-203ENST00000571780 12667 ntBASIC4.89□□□□□ -1.63
GAFA1Q96PS6 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
GAFA1Q96PS6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 RNU1-150P-201ENST00000362491 162 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 MIR1203-201ENST00000408812 85 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 BX323845.3-201ENST00000428215 527 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC096775.1-201ENST00000437724 448 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 H3F3BP1-201ENST00000440551 403 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC015983.1-201ENST00000441577 373 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 ACA64.1-201ENST00000459171 127 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC099521.1-201ENST00000482557 334 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 snoU109.5-201ENST00000516231 132 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC018558.5-201ENST00000565840 952 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC087269.2-201ENST00000641764 975 ntBASIC4.88□□□□□ -1.63
GAFA1Q96PS6 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.88□□□□□ -1.63
GAFA1Q96PS6 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AL137141.1-201ENST00000624622 4836 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 IMMTP1-201ENST00000435590 2219 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 RN7SKP29-201ENST00000410957 272 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 RPL23AP18-201ENST00000416139 468 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC092651.1-201ENST00000426110 312 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC126120.1-201ENST00000431082 470 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 RPL5P10-201ENST00000445207 894 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC004129.2-201ENST00000457229 287 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 RNU1-88P-201ENST00000459274 128 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC006539.1-201ENST00000481419 501 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC006499.4-201ENST00000510947 694 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 IGLV3-30-201ENST00000524362 298 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC092121.1-201ENST00000569452 202 ntBASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.87□□□□□ -1.63
GAFA1Q96PS6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms