Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC022164.1-201ENST00000568767 2673 ntBASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 AL359955.1-201ENST00000455242 3275 ntBASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 AL449283.1-201ENST00000602631 3403 ntBASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CHAMP1Q96JM3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC119674.1-213ENST00000641177 1386 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 RN7SKP171-201ENST00000364417 303 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 SNORD115-48-201ENST00000364764 76 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AL359092.1-201ENST00000417156 265 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 RPS17P17-201ENST00000419392 409 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 NAP1L4P2-201ENST00000425958 899 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AL596268.1-201ENST00000427910 1048 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AL513321.1-201ENST00000441175 761 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 Z83846.1-201ENST00000446798 265 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AL451063.1-201ENST00000450164 1133 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 NPM1P17-201ENST00000479221 602 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 TRBV8-1-201ENST00000481590 279 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 MTCYBP35-201ENST00000503630 1137 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 RN7SKP5-201ENST00000517045 272 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC103833.1-201ENST00000517442 172 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC084851.2-201ENST00000530377 364 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 UBTFL9-201ENST00000534504 1148 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 MTCYBP27-201ENST00000555160 670 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC090286.3-201ENST00000573133 187 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 MIR4312-201ENST00000579909 76 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 MTCO2P2-201ENST00000591258 225 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC073046.2-201ENST00000604756 527 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC025016.1-201ENST00000616746 682 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC073593.1-201ENST00000624500 411 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC069542.2-201ENST00000624816 216 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 CLUHP10-201ENST00000631979 980 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 MIR665-201ENST00000635949 72 ntBASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHAMP1Q96JM3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 HSPD1P1-201ENST00000503199 1726 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AC004023.1-201ENST00000561473 1744 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AC010132.4-201ENST00000569883 1368 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 RNU1-56P-201ENST00000391303 164 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AC007562.1-201ENST00000421819 517 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AC013262.1-201ENST00000426710 252 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 GAPDHP20-201ENST00000444107 1007 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AC023274.2-201ENST00000445264 521 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 TIMM8BP2-201ENST00000445940 251 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AL022237.1-201ENST00000446663 358 ntBASIC7.38□□□□□ -1.23
CHAMP1Q96JM3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 240.7 ms