Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 RPL31P11-201ENST00000426558 1558 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.42□□□□□ -1.54
RFT1Q96AA3 HDAC1P2-201ENST00000453661 1398 ntBASIC5.42□□□□□ -1.54
RFT1Q96AA3 AC004076.2-201ENST00000620532 3323 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 RNU1-5P-201ENST00000362684 144 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 RNU4-23P-201ENST00000362839 140 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 RNU1-84P-201ENST00000365447 164 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 RNA5SP155-201ENST00000411154 129 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 VN1R31P-201ENST00000417498 730 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 GNG5P5-201ENST00000420444 220 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 VTI1BP4-201ENST00000427516 527 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 BX276092.6-201ENST00000430476 250 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 MED28P4-201ENST00000433137 572 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 GTF2IP14-201ENST00000441415 586 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 BX276092.8-201ENST00000455722 250 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL354872.1-201ENST00000456361 967 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 RNA5SP75-201ENST00000516841 111 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 OR9G2P-201ENST00000533326 880 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 RN7SL657P-201ENST00000582431 293 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 SYPL1P2-201ENST00000582878 727 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 RN7SL475P-201ENST00000583379 298 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AC006363.1-201ENST00000603806 463 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 BNIP3P7-201ENST00000605641 516 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 OR7M1P-201ENST00000608946 533 ntBASIC5.41□□□□□ -1.54
RFT1Q96AA3 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
RFT1Q96AA3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFT1Q96AA3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFT1Q96AA3 AP005432.1-201ENST00000580891 3485 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFT1Q96AA3 AC112255.1-201ENST00000624070 2493 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFT1Q96AA3 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFT1Q96AA3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFT1Q96AA3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 AL445238.1-204ENST00000400311 463 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 AL354707.3-201ENST00000427308 331 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 AC083862.1-201ENST00000427378 1242 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 AC013403.1-201ENST00000436954 263 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 HMGN1P32-201ENST00000441744 256 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 CTSLP6-201ENST00000458273 1002 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 RPS7P11-201ENST00000484240 586 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 RN7SL714P-201ENST00000487050 298 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 AGGF1P3-201ENST00000493675 1213 ntBASIC5.4□□□□□ -1.54
RFT1Q96AA3 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFT1Q96AA3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.4□□□□□ -1.54
RFT1Q96AA3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms