Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 AL353743.3-201ENST00000442109 1468 ntBASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
SMC1BQ8NDV3 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 RNU11-6P-201ENST00000391127 133 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 MTND4LP21-201ENST00000415303 295 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AC093155.2-201ENST00000420734 937 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AL034399.1-201ENST00000451535 380 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 OR51A1P-201ENST00000511110 946 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AC010374.2-201ENST00000512933 535 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 BX510359.5-201ENST00000515651 304 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 OR4A21P-201ENST00000532759 944 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AC120053.1-201ENST00000607706 736 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AC008147.4-201ENST00000617570 1204 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 MIR193BHG-214ENST00000641765 509 ntBASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SMC1BQ8NDV3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
SMC1BQ8NDV3 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.59□□□□□ -1.2
SMC1BQ8NDV3 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
SMC1BQ8NDV3 AF287957.1-201ENST00000607368 1595 ntBASIC7.59□□□□□ -1.2
SMC1BQ8NDV3 NEPNP-201ENST00000404786 1371 ntBASIC7.59□□□□□ -1.2
SMC1BQ8NDV3 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC016251.2-201ENST00000623393 3089 ntBASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 WDR95P-201ENST00000425638 1542 ntBASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 RNU6-171P-201ENST00000384354 107 ntBASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 SPRYD7P1-201ENST00000443861 570 ntBASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 HIGD1AP16-201ENST00000450986 258 ntBASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 FO393422.1-201ENST00000603908 708 ntBASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AL049777.1-201ENST00000622740 518 ntBASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 AC073342.3-201ENST00000624211 193 ntBASIC7.58□□□□□ -1.2
SMC1BQ8NDV3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms