Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RPL12P31-201ENST00000478433 450 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 RN7SL502P-201ENST00000481857 290 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 RNA5SP206-201ENST00000516703 121 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 CASP1P2-201ENST00000526830 1258 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC037479.1-201ENST00000558361 625 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC026898.1-201ENST00000586404 571 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC027334.1-201ENST00000603257 310 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC011458.1-201ENST00000604034 617 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC211486.4-201ENST00000621495 113 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 FO681491.1-202ENST00000623392 737 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC132825.8-201ENST00000640783 297 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC009452.1-201ENST00000640823 606 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 OR7A1P-202ENST00000641542 1158 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC010401.2-201ENST00000575137 4934 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 AP001284.1-201ENST00000528393 2118 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 CCNT2P1-201ENST00000423082 1315 ntBASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.74□□□□□ -1.49
CLIP4Q8N3C7 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC217777.1-201ENST00000570034 1471 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 MTCO1P22-201ENST00000604619 1360 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 SNORA43.1-201ENST00000364863 140 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AL157702.1-201ENST00000398764 426 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 PEX12P1-201ENST00000400284 1048 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 RN7SKP151-201ENST00000410230 316 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AL022324.2-201ENST00000434827 780 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 SCAND3P1-201ENST00000439854 1060 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 OR2L9P-201ENST00000444456 913 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 VN1R48P-201ENST00000448149 1036 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC112187.1-201ENST00000455837 479 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 RN7SL552P-201ENST00000462094 276 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 RN7SL39P-201ENST00000462264 297 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 HMGN1P8-201ENST00000463578 288 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 RN7SL326P-201ENST00000477493 296 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC008945.1-201ENST00000505144 499 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC135983.3-201ENST00000528049 1226 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC092865.1-201ENST00000544395 1023 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC004232.2-201ENST00000574245 821 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 MIR212-201ENST00000586026 110 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 AC010998.3-201ENST00000613871 631 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 RNA5SP439-201ENST00000617595 124 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 OR9K1P-202ENST00000641111 3217 ntBASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLIP4Q8N3C7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms