Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.65□□□□□ -1.02
CDC42BPAQ5VT25 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 GAPDHP24-201ENST00000328713 983 ntBASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 AP003119.3-201ENST00000566747 4192 ntBASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 MFSD8-239ENST00000641590 2479 ntBASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
CDC42BPAQ5VT25 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 AC008171.1-201ENST00000395058 200 ntBASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 RN7SL610P-201ENST00000463845 291 ntBASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 RPL7P6-201ENST00000480903 738 ntBASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 AC090638.1-201ENST00000498296 909 ntBASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 AC005034.3-201ENST00000604845 1747 ntBASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 AC092724.1-201ENST00000624623 3397 ntBASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CDC42BPAQ5VT25 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 RPL35AP28-201ENST00000459730 331 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC004836.1-201ENST00000623032 634 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC006511.3-201ENST00000624929 1783 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC114876.1-201ENST00000490962 1366 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC005294.1-201ENST00000355509 281 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 SNORA16A-201ENST00000384342 137 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 MIR223-201ENST00000385204 110 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 PSMD10P3-201ENST00000437000 448 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 LDHAP2-201ENST00000437325 985 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 RPL12P3-201ENST00000440080 396 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC015864.1-201ENST00000496512 544 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 DPPA3P2-202ENST00000557188 1219 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 MIR4301-201ENST00000577203 66 ntBASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.63□□□□□ -1.03
CDC42BPAQ5VT25 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 AC073429.2-201ENST00000569694 1444 ntBASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
CDC42BPAQ5VT25 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms