Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HDAC4P56524 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 AC092724.1-201ENST00000624623 3397 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HDAC4P56524 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
HDAC4P56524 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.45□□□□□ -1.38
HDAC4P56524 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HDAC4P56524 AC011416.1-201ENST00000514947 1732 ntBASIC6.45□□□□□ -1.38
HDAC4P56524 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC4P56524 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC4P56524 AC093671.1-201ENST00000624981 2929 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
HDAC4P56524 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC4P56524 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC4P56524 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC4P56524 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC4P56524 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC4P56524 AL354707.3-201ENST00000427308 331 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AC242426.1-201ENST00000435270 960 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 GAPDHP59-201ENST00000435908 267 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC4P56524 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC4P56524 AC079922.1-201ENST00000443291 359 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC4P56524 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC4P56524 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.44□□□□□ -1.38
HDAC4P56524 AC112187.1-201ENST00000455837 479 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC4P56524 OR7E22P-201ENST00000478335 1035 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 RNA5SP434-201ENST00000516647 121 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC4P56524 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.44□□□□□ -1.38
HDAC4P56524 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC4P56524 OR4A41P-201ENST00000533053 928 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.44□□□□□ -1.38
HDAC4P56524 HNRNPCP1-201ENST00000556181 766 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC4P56524 AC121758.1-202ENST00000556917 658 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.44□□□□□ -1.38
HDAC4P56524 AL078601.3-201ENST00000573303 535 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AC004232.2-201ENST00000574245 821 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 OR1E3-201ENST00000575608 948 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AP000919.1-201ENST00000582850 985 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AP005136.2-201ENST00000583253 1049 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AC020916.2-201ENST00000591242 360 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AC008555.7-201ENST00000605008 583 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AL080312.2-201ENST00000613001 630 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.44□□□□□ -1.38
HDAC4P56524 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC4P56524 AP003400.6-201ENST00000624698 740 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 LINC02019-201ENST00000608605 2060 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HDAC4P56524 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.44□□□□□ -1.38
HDAC4P56524 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 CCNT2P1-201ENST00000423082 1315 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 AC024587.1-201ENST00000505925 2157 ntBASIC6.44□□□□□ -1.38
HDAC4P56524 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HDAC4P56524 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
HDAC4P56524 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.43□□□□□ -1.38
HDAC4P56524 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.43□□□□□ -1.38
HDAC4P56524 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.43□□□□□ -1.38
HDAC4P56524 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
HDAC4P56524 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 AL359091.1-201ENST00000449048 1734 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HDAC4P56524 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC4P56524 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HDAC4P56524 RNA5SP110-201ENST00000362638 115 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 RN7SKP237-201ENST00000364663 301 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 YWHAZP6-201ENST00000399764 738 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.43□□□□□ -1.38
HDAC4P56524 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.43□□□□□ -1.38
HDAC4P56524 RPL5P10-201ENST00000445207 894 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.43□□□□□ -1.38
HDAC4P56524 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.43□□□□□ -1.38
HDAC4P56524 MARK2P8-201ENST00000476069 952 ntBASIC6.43□□□□□ -1.38
HDAC4P56524 AC005017.1-201ENST00000482002 490 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms