Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL359091.1-201ENST00000449048 1734 ntBASIC5.71□□□□□ -1.49
CDH12P55289 AC137056.2-201ENST00000624055 1958 ntBASIC5.71□□□□□ -1.49
CDH12P55289 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.71□□□□□ -1.49
CDH12P55289 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CDH12P55289 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 SNORD1C-201ENST00000363315 78 ntBASIC5.71□□□□□ -1.5
CDH12P55289 SNORA43.1-201ENST00000364863 140 ntBASIC5.71□□□□□ -1.5
CDH12P55289 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH12P55289 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 RBBP4P5-201ENST00000398583 1266 ntBASIC5.71□□□□□ -1.5
CDH12P55289 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CDH12P55289 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH12P55289 RPL12P16-201ENST00000431098 498 ntBASIC5.71□□□□□ -1.5
CDH12P55289 LDHAP2-201ENST00000437325 985 ntBASIC5.71□□□□□ -1.5
CDH12P55289 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 MORF4-201ENST00000447135 971 ntBASIC5.71□□□□□ -1.5
CDH12P55289 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
CDH12P55289 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 RAB28P2-201ENST00000454299 641 ntBASIC5.71□□□□□ -1.5
CDH12P55289 AC002075.1-201ENST00000457396 676 ntBASIC5.71□□□□□ -1.5
CDH12P55289 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH12P55289 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH12P55289 AC139713.1-202ENST00000512366 460 ntBASIC5.71□□□□□ -1.5
CDH12P55289 KCTD9P6-201ENST00000522306 950 ntBASIC5.71□□□□□ -1.5
CDH12P55289 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 OR6M2P-201ENST00000529831 871 ntBASIC5.71□□□□□ -1.5
CDH12P55289 AC008055.1-201ENST00000547032 609 ntBASIC5.71□□□□□ -1.5
CDH12P55289 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH12P55289 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH12P55289 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH12P55289 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 AC005776.1-201ENST00000603164 290 ntBASIC5.71□□□□□ -1.5
CDH12P55289 PPATP2-201ENST00000605635 508 ntBASIC5.71□□□□□ -1.5
CDH12P55289 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 U91328.4-201ENST00000608919 517 ntBASIC5.71□□□□□ -1.5
CDH12P55289 AC068726.1-201ENST00000610993 341 ntBASIC5.71□□□□□ -1.5
CDH12P55289 AP006248.3-201ENST00000623580 594 ntBASIC5.71□□□□□ -1.5
CDH12P55289 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 OR7A1P-202ENST00000641542 1158 ntBASIC5.71□□□□□ -1.5
CDH12P55289 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH12P55289 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CDH12P55289 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH12P55289 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.71□□□□□ -1.5
CDH12P55289 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH12P55289 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CDH12P55289 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH12P55289 MSL3P1-202ENST00000440028 1468 ntBASIC5.71□□□□□ -1.5
CDH12P55289 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH12P55289 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 AC004656.1-201ENST00000568479 4951 ntBASIC5.7□□□□□ -1.5
CDH12P55289 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH12P55289 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 SNORD94-201ENST00000386037 137 ntBASIC5.7□□□□□ -1.5
CDH12P55289 RNU6-316P-201ENST00000391027 107 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AC003045.1-201ENST00000398779 713 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AL121977.1-201ENST00000401636 979 ntBASIC5.7□□□□□ -1.5
CDH12P55289 VIM2P-201ENST00000402383 1294 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AL355143.1-201ENST00000407101 841 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AC096644.3-201ENST00000416788 338 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH12P55289 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH12P55289 RPL21P50-201ENST00000417698 477 ntBASIC5.7□□□□□ -1.5
CDH12P55289 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH12P55289 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 GPN3P1-201ENST00000423883 535 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AL590399.2-201ENST00000427536 309 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AC073508.1-201ENST00000428866 656 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AC023141.6-201ENST00000429418 337 ntBASIC5.7□□□□□ -1.5
CDH12P55289 OR6R1P-201ENST00000431838 940 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH12P55289 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 WDR82P2-201ENST00000444540 928 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH12P55289 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH12P55289 AC015524.1-201ENST00000491585 472 ntBASIC5.7□□□□□ -1.5
CDH12P55289 GM2AP2-201ENST00000491764 562 ntBASIC5.7□□□□□ -1.5
CDH12P55289 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH12P55289 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH12P55289 MTND1P6-201ENST00000523621 946 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms