Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPS3AP2-201ENST00000407190 754 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 RN7SKP281-201ENST00000410472 352 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AL356968.2-201ENST00000412769 1257 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 RPL23AP85-201ENST00000421838 433 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AL034379.1-201ENST00000423216 253 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 NIPA2P1-201ENST00000426223 976 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC092593.2-201ENST00000513866 913 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC022404.1-201ENST00000555320 273 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 TPRX1P1-201ENST00000557620 319 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.23□□□□□ -1.41
LIMK1P53667 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 AC073333.2-201ENST00000603589 769 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AC108673.3-201ENST00000609183 335 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AC091768.1-201ENST00000609258 930 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AL352984.2-202ENST00000613699 155 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AP005212.4-201ENST00000614206 710 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AC018445.2-201ENST00000622987 260 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 AP000577.1-201ENST00000624366 878 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK1P53667 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK1P53667 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LIMK1P53667 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LIMK1P53667 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LIMK1P53667 AC112255.1-201ENST00000624070 2493 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 OLMALINC-203ENST00000641087 3779 ntBASIC6.23□□□□□ -1.41
LIMK1P53667 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LIMK1P53667 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LIMK1P53667 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.23□□□□□ -1.41
LIMK1P53667 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LIMK1P53667 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 AC025809.2-201ENST00000625085 1802 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 Z83820.1-201ENST00000456978 1499 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC011416.1-201ENST00000514947 1732 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC083837.1-201ENST00000565297 2994 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AP005432.1-201ENST00000580891 3485 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AL662795.2-201ENST00000624252 3706 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
LIMK1P53667 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
LIMK1P53667 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 SNORD16-201ENST00000362803 99 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 RN7SKP160-201ENST00000363804 340 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.22□□□□□ -1.41
LIMK1P53667 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.22□□□□□ -1.41
LIMK1P53667 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK1P53667 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.22□□□□□ -1.41
LIMK1P53667 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK1P53667 BX284632.2-201ENST00000421091 399 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 NANOGP4-201ENST00000427230 913 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 UBE2V2P1-201ENST00000434717 398 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK1P53667 RPL36AP39-201ENST00000445859 318 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK1P53667 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK1P53667 AC002553.3-201ENST00000453002 341 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
LIMK1P53667 UBFD1P1-201ENST00000473259 814 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 RN7SL561P-201ENST00000488553 281 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.22□□□□□ -1.41
LIMK1P53667 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.22□□□□□ -1.41
LIMK1P53667 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 AP000648.1-201ENST00000529682 397 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.22□□□□□ -1.41
LIMK1P53667 AC010547.6-201ENST00000571789 193 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 AC011497.2-201ENST00000600255 639 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.22□□□□□ -1.41
LIMK1P53667 AL031601.1-201ENST00000605702 394 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AC006924.1-201ENST00000610750 559 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 AF117829.2-201ENST00000619538 361 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.22□□□□□ -1.41
LIMK1P53667 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.22□□□□□ -1.41
LIMK1P53667 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LIMK1P53667 TTC41P-205ENST00000551270 3963 ntBASIC6.22□□□□□ -1.41
LIMK1P53667 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms