Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPB1P53618 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
COPB1P53618 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COPB1P53618 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
COPB1P53618 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPB1P53618 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COPB1P53618 Y_RNA.110-201ENST00000363220 99 ntBASIC6.64□□□□□ -1.35
COPB1P53618 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.64□□□□□ -1.35
COPB1P53618 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.64□□□□□ -1.35
COPB1P53618 RPS15AP30-201ENST00000420976 390 ntBASIC6.64□□□□□ -1.35
COPB1P53618 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.64□□□□□ -1.35
COPB1P53618 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.64□□□□□ -1.35
COPB1P53618 ARMC4P1-201ENST00000438905 707 ntBASIC6.64□□□□□ -1.35
COPB1P53618 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.64□□□□□ -1.35
COPB1P53618 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.64□□□□□ -1.35
COPB1P53618 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 RNA5SP434-201ENST00000516647 121 ntBASIC6.64□□□□□ -1.35
COPB1P53618 RN7SKP70-201ENST00000516655 271 ntBASIC6.64□□□□□ -1.35
COPB1P53618 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COPB1P53618 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 TDGP1-201ENST00000543961 1229 ntBASIC6.64□□□□□ -1.35
COPB1P53618 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 AC063977.7-201ENST00000594454 337 ntBASIC6.64□□□□□ -1.35
COPB1P53618 BNIP3P39-201ENST00000601077 554 ntBASIC6.64□□□□□ -1.35
COPB1P53618 AC104307.1-201ENST00000616142 196 ntBASIC6.64□□□□□ -1.35
COPB1P53618 MIR6811-201ENST00000620409 58 ntBASIC6.64□□□□□ -1.35
COPB1P53618 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.64□□□□□ -1.35
COPB1P53618 MSL3P1-202ENST00000440028 1468 ntBASIC6.64□□□□□ -1.35
COPB1P53618 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
COPB1P53618 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPB1P53618 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COPB1P53618 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COPB1P53618 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.63□□□□□ -1.35
COPB1P53618 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.63□□□□□ -1.35
COPB1P53618 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.63□□□□□ -1.35
COPB1P53618 RN7SKP187-201ENST00000365536 330 ntBASIC6.63□□□□□ -1.35
COPB1P53618 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.63□□□□□ -1.35
COPB1P53618 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.63□□□□□ -1.35
COPB1P53618 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COPB1P53618 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.63□□□□□ -1.35
COPB1P53618 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.63□□□□□ -1.35
COPB1P53618 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.63□□□□□ -1.35
COPB1P53618 MTND2P15-201ENST00000418575 892 ntBASIC6.63□□□□□ -1.35
COPB1P53618 AC083899.2-201ENST00000423285 1376 ntBASIC6.63□□□□□ -1.35
COPB1P53618 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.63□□□□□ -1.35
COPB1P53618 MRPS21P3-201ENST00000436696 262 ntBASIC6.63□□□□□ -1.35
COPB1P53618 KRT8P51-201ENST00000438938 274 ntBASIC6.63□□□□□ -1.35
COPB1P53618 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.63□□□□□ -1.35
COPB1P53618 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.63□□□□□ -1.35
COPB1P53618 ACA64.4-201ENST00000459070 127 ntBASIC6.63□□□□□ -1.35
COPB1P53618 MORF4L2P1-201ENST00000503761 858 ntBASIC6.63□□□□□ -1.35
COPB1P53618 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.63□□□□□ -1.35
COPB1P53618 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.63□□□□□ -1.35
COPB1P53618 AC138517.1-201ENST00000515724 568 ntBASIC6.63□□□□□ -1.35
COPB1P53618 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.63□□□□□ -1.35
COPB1P53618 IGKV2-19-201ENST00000518132 283 ntBASIC6.63□□□□□ -1.35
COPB1P53618 NATP-201ENST00000523491 878 ntBASIC6.63□□□□□ -1.35
COPB1P53618 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COPB1P53618 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.63□□□□□ -1.35
COPB1P53618 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.63□□□□□ -1.35
COPB1P53618 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.63□□□□□ -1.35
COPB1P53618 MTND4LP25-201ENST00000570218 163 ntBASIC6.63□□□□□ -1.35
COPB1P53618 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.63□□□□□ -1.35
COPB1P53618 uc_338.26-201ENST00000612659 160 ntBASIC6.63□□□□□ -1.35
COPB1P53618 MIR7109-201ENST00000613748 65 ntBASIC6.63□□□□□ -1.35
COPB1P53618 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.63□□□□□ -1.35
COPB1P53618 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
COPB1P53618 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
COPB1P53618 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COPB1P53618 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
COPB1P53618 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
COPB1P53618 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COPB1P53618 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
COPB1P53618 RNU105B-201ENST00000364478 208 ntBASIC6.62□□□□□ -1.35
COPB1P53618 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.62□□□□□ -1.35
COPB1P53618 YWHAZP4-201ENST00000392459 708 ntBASIC6.62□□□□□ -1.35
COPB1P53618 VN1R12P-201ENST00000403778 876 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms