Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL590635.1-201ENST00000406314 586 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AL117344.1-201ENST00000407196 616 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-1P43699 ELOBP4-201ENST00000423418 296 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX2-1P43699 RPS6P14-201ENST00000425165 719 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 FAR1P1-201ENST00000427163 934 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 MED28P4-201ENST00000433137 572 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 USP24P1-201ENST00000433802 779 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AC073410.1-201ENST00000435125 589 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AC046176.1-201ENST00000435260 1170 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 SEPT14P12-201ENST00000442280 560 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-1P43699 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX2-1P43699 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 ST13P21-201ENST00000453250 1098 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 RANP2-201ENST00000456833 229 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 MTND6P32-201ENST00000457611 483 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-1P43699 RPS10P28-201ENST00000480396 498 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 AC114940.1-201ENST00000512162 1265 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 RN7SKP34-201ENST00000516142 244 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 RNA5SP75-201ENST00000516841 111 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AC021269.1-201ENST00000526860 705 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AC103855.4-201ENST00000533158 265 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX2-1P43699 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 DUX4L52-201ENST00000549363 777 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AL049779.3-201ENST00000557141 606 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX2-1P43699 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-1P43699 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-1P43699 FCGR1CP-201ENST00000579737 1127 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AC027229.1-201ENST00000583887 253 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AC020916.2-201ENST00000591242 360 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AC025857.2-201ENST00000602711 238 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AC067838.1-201ENST00000606064 577 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AL512413.1-201ENST00000606489 382 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AC074276.2-201ENST00000619891 348 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AL356490.1-201ENST00000623079 479 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NKX2-1P43699 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AC003973.3-201ENST00000624863 2822 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
NKX2-1P43699 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NKX2-1P43699 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
NKX2-1P43699 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NKX2-1P43699 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX2-1P43699 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX2-1P43699 AL355488.2-201ENST00000609909 2850 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NKX2-1P43699 AL355834.1-201ENST00000556602 3965 ntBASIC5.06□□□□□ -1.6
NKX2-1P43699 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.05□□□□□ -1.6
NKX2-1P43699 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NKX2-1P43699 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-1P43699 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-1P43699 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC010132.2-201ENST00000295493 1043 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NKX2-1P43699 RNA5SP382-201ENST00000363355 112 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 RNA5SP302-201ENST00000364896 100 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 MRPS6P2-201ENST00000381143 370 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 RNU2-72P-201ENST00000411175 163 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AL139135.1-201ENST00000412675 209 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 GLUD1P9-201ENST00000420997 1173 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AL606490.7-201ENST00000433136 191 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 CHCHD4P5-201ENST00000436684 427 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC016908.1-201ENST00000442571 1219 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.05□□□□□ -1.6
NKX2-1P43699 VN1R48P-201ENST00000448149 1036 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NKX2-1P43699 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.05□□□□□ -1.6
NKX2-1P43699 AC073594.1-201ENST00000462065 364 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 RN7SL352P-201ENST00000466002 277 ntBASIC5.05□□□□□ -1.6
NKX2-1P43699 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms