Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 RAB28P2-201ENST00000454299 641 ntBASIC6.49□□□□□ -1.37
SSR1P43307 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.49□□□□□ -1.37
SSR1P43307 AL355032.1-201ENST00000472981 438 ntBASIC6.49□□□□□ -1.37
SSR1P43307 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.49□□□□□ -1.37
SSR1P43307 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.49□□□□□ -1.37
SSR1P43307 OR4D12P-201ENST00000509361 911 ntBASIC6.49□□□□□ -1.37
SSR1P43307 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.49□□□□□ -1.37
SSR1P43307 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.49□□□□□ -1.37
SSR1P43307 CCDC58P1-201ENST00000578567 430 ntBASIC6.49□□□□□ -1.37
SSR1P43307 AC026898.1-201ENST00000586404 571 ntBASIC6.49□□□□□ -1.37
SSR1P43307 DYNLL1P1-201ENST00000595442 269 ntBASIC6.49□□□□□ -1.37
SSR1P43307 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.49□□□□□ -1.37
SSR1P43307 AC027334.1-201ENST00000603257 310 ntBASIC6.49□□□□□ -1.37
SSR1P43307 AC010998.3-201ENST00000613871 631 ntBASIC6.49□□□□□ -1.37
SSR1P43307 AC089999.3-201ENST00000622440 577 ntBASIC6.49□□□□□ -1.37
SSR1P43307 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.49□□□□□ -1.37
SSR1P43307 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 AC024587.1-201ENST00000505925 2157 ntBASIC6.49□□□□□ -1.37
SSR1P43307 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SSR1P43307 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
SSR1P43307 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.49□□□□□ -1.37
SSR1P43307 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 AC079248.1-201ENST00000427568 1546 ntBASIC6.49□□□□□ -1.37
SSR1P43307 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SSR1P43307 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SSR1P43307 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.48□□□□□ -1.37
SSR1P43307 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 AL359091.1-201ENST00000449048 1734 ntBASIC6.48□□□□□ -1.37
SSR1P43307 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.48□□□□□ -1.37
SSR1P43307 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 AL133243.2-201ENST00000610331 1621 ntBASIC6.48□□□□□ -1.37
SSR1P43307 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 RNU1-49P-201ENST00000363468 159 ntBASIC6.48□□□□□ -1.37
SSR1P43307 RNA5SP346-201ENST00000363541 121 ntBASIC6.48□□□□□ -1.37
SSR1P43307 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSR1P43307 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 VIM2P-201ENST00000402383 1294 ntBASIC6.48□□□□□ -1.37
SSR1P43307 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.48□□□□□ -1.37
SSR1P43307 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.48□□□□□ -1.37
SSR1P43307 AL022324.2-201ENST00000434827 780 ntBASIC6.48□□□□□ -1.37
SSR1P43307 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 RPS18P1-201ENST00000447840 458 ntBASIC6.48□□□□□ -1.37
SSR1P43307 GAPDHP14-201ENST00000450472 937 ntBASIC6.48□□□□□ -1.37
SSR1P43307 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.48□□□□□ -1.37
SSR1P43307 RN7SL393P-201ENST00000463588 296 ntBASIC6.48□□□□□ -1.37
SSR1P43307 RN7SL352P-201ENST00000466002 277 ntBASIC6.48□□□□□ -1.37
SSR1P43307 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.48□□□□□ -1.37
SSR1P43307 AC114324.2-202ENST00000503812 134 ntBASIC6.48□□□□□ -1.37
SSR1P43307 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.48□□□□□ -1.37
SSR1P43307 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.48□□□□□ -1.37
SSR1P43307 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.48□□□□□ -1.37
SSR1P43307 RNU4ATAC-201ENST00000580972 127 ntBASIC6.48□□□□□ -1.37
SSR1P43307 MIR132-201ENST00000591554 101 ntBASIC6.48□□□□□ -1.37
SSR1P43307 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.48□□□□□ -1.37
SSR1P43307 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.48□□□□□ -1.37
SSR1P43307 AL137067.2-201ENST00000621202 131 ntBASIC6.48□□□□□ -1.37
SSR1P43307 AC011503.2-201ENST00000594230 1500 ntBASIC6.48□□□□□ -1.37
SSR1P43307 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSR1P43307 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SSR1P43307 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.48□□□□□ -1.37
SSR1P43307 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.48□□□□□ -1.37
SSR1P43307 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SSR1P43307 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.47□□□□□ -1.37
SSR1P43307 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.47□□□□□ -1.37
SSR1P43307 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSR1P43307 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSR1P43307 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSR1P43307 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSR1P43307 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSR1P43307 AL157702.1-201ENST00000398764 426 ntBASIC6.47□□□□□ -1.37
SSR1P43307 PRELID1P1-201ENST00000403549 660 ntBASIC6.47□□□□□ -1.37
SSR1P43307 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.47□□□□□ -1.37
SSR1P43307 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.47□□□□□ -1.37
SSR1P43307 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.47□□□□□ -1.37
SSR1P43307 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.47□□□□□ -1.37
SSR1P43307 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.47□□□□□ -1.37
SSR1P43307 AL445687.2-201ENST00000458156 728 ntBASIC6.47□□□□□ -1.37
SSR1P43307 RN7SL188P-201ENST00000469842 285 ntBASIC6.47□□□□□ -1.37
SSR1P43307 RPL12P31-201ENST00000478433 450 ntBASIC6.47□□□□□ -1.37
SSR1P43307 AC117500.1-201ENST00000497352 755 ntBASIC6.47□□□□□ -1.37
SSR1P43307 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms