Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC073410.1-201ENST00000435125 589 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PTPN6P29350 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC093166.3-201ENST00000448785 303 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC068491.1-201ENST00000449539 1241 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 HIGD1AP16-201ENST00000450986 258 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 RAB28P2-201ENST00000454299 641 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN6P29350 TRBV5-2-201ENST00000489095 273 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 RN7SL104P-201ENST00000498686 293 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN6P29350 SNX18P25-201ENST00000510539 758 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 HMGN1P17-201ENST00000513734 295 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 Vault.2-201ENST00000516519 98 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 Y_RNA.710-201ENST00000516975 110 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC004232.2-201ENST00000574245 821 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC005224.3-201ENST00000584683 2140 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC119403.2-201ENST00000590960 598 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.76□□□□□ -1.49
PTPN6P29350 CXADRP3-202ENST00000617265 1100 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN6P29350 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PTPN6P29350 AC079753.1-201ENST00000623243 3868 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 AC024651.2-201ENST00000562480 2098 ntBASIC5.76□□□□□ -1.49
PTPN6P29350 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PTPN6P29350 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN6P29350 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN6P29350 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
PTPN6P29350 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.75□□□□□ -1.49
PTPN6P29350 AL161756.3-201ENST00000641216 2071 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 RN7SKP166-201ENST00000410812 305 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 AC092865.3-201ENST00000425390 1026 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 AL590399.2-201ENST00000427536 309 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 AC108479.1-201ENST00000431142 427 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 BTG3P1-201ENST00000435859 716 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 AL138899.2-201ENST00000439139 499 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 AL645936.1-201ENST00000441979 518 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 CTSLP6-201ENST00000458273 1002 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.75□□□□□ -1.49
PTPN6P29350 AC012123.2-201ENST00000485809 248 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 PPP1R11P1-201ENST00000486095 376 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 AC021006.1-201ENST00000489849 553 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 IGKV2-19-201ENST00000518132 283 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 NPIPB14P-203ENST00000532298 987 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.75□□□□□ -1.49
PTPN6P29350 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 MIR4420-201ENST00000583944 77 ntBASIC5.75□□□□□ -1.49
PTPN6P29350 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.75□□□□□ -1.49
PTPN6P29350 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
PTPN6P29350 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.75□□□□□ -1.49
PTPN6P29350 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PTPN6P29350 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN6P29350 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN6P29350 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 AC018717.1-201ENST00000457712 1505 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PTPN6P29350 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 AC027575.3-201ENST00000583058 2747 ntBASIC5.74□□□□□ -1.49
PTPN6P29350 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.74□□□□□ -1.49
PTPN6P29350 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms