Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 HPRT1P1-201ENST00000509498 657 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AC147055.3-201ENST00000510547 851 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AC017007.1-201ENST00000511960 415 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AC087752.2-201ENST00000521219 281 ntBASIC7.83□□□□□ -1.16
LIG1P18858 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 OR4V1P-201ENST00000525394 1140 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AP001803.1-201ENST00000525668 147 ntBASIC7.83□□□□□ -1.16
LIG1P18858 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 AC007346.2-201ENST00000564816 892 ntBASIC7.83□□□□□ -1.16
LIG1P18858 EIF4A3P1-201ENST00000578499 647 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.83□□□□□ -1.16
LIG1P18858 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC7.83□□□□□ -1.16
LIG1P18858 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 AL035410.2-201ENST00000604963 864 ntBASIC7.83□□□□□ -1.16
LIG1P18858 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.83□□□□□ -1.16
LIG1P18858 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 SNX18P3-202ENST00000565670 1750 ntBASIC7.83□□□□□ -1.16
LIG1P18858 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 AL356473.1-201ENST00000406203 1408 ntBASIC7.83□□□□□ -1.16
LIG1P18858 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.83□□□□□ -1.16
LIG1P18858 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 OFD1P17-201ENST00000437639 3018 ntBASIC7.83□□□□□ -1.16
LIG1P18858 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
LIG1P18858 AC093844.1-201ENST00000514910 1361 ntBASIC7.83□□□□□ -1.16
LIG1P18858 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
LIG1P18858 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 AC053481.2-202ENST00000582394 1500 ntBASIC7.83□□□□□ -1.16
LIG1P18858 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.83□□□□□ -1.16
LIG1P18858 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
LIG1P18858 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.82□□□□□ -1.16
LIG1P18858 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 SLC2A3P4-201ENST00000521259 1471 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AL391261.1-201ENST00000555712 1479 ntBASIC7.82□□□□□ -1.16
LIG1P18858 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.82□□□□□ -1.16
LIG1P18858 AL033543.1-201ENST00000623440 13454 ntBASIC7.82□□□□□ -1.16
LIG1P18858 OR2M1P-201ENST00000318104 951 ntBASIC7.82□□□□□ -1.16
LIG1P18858 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 FUNDC2P3-201ENST00000334716 533 ntBASIC7.82□□□□□ -1.16
LIG1P18858 RNU12-2P-201ENST00000364789 156 ntBASIC7.82□□□□□ -1.16
LIG1P18858 RN7SKP55-201ENST00000364888 307 ntBASIC7.82□□□□□ -1.16
LIG1P18858 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.82□□□□□ -1.16
LIG1P18858 AL049697.3-201ENST00000406493 982 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AL451061.1-201ENST00000407887 862 ntBASIC7.82□□□□□ -1.16
LIG1P18858 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC7.82□□□□□ -1.16
LIG1P18858 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.82□□□□□ -1.16
LIG1P18858 RAB9AP4-201ENST00000415230 609 ntBASIC7.82□□□□□ -1.16
LIG1P18858 OFD1P11Y-201ENST00000418213 1177 ntBASIC7.82□□□□□ -1.16
LIG1P18858 USP9YP26-201ENST00000421008 661 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 AL035407.1-201ENST00000429211 571 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC005345.1-201ENST00000431868 217 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 CHCHD4P5-201ENST00000436684 427 ntBASIC7.82□□□□□ -1.16
LIG1P18858 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AL138878.2-201ENST00000440581 1241 ntBASIC7.82□□□□□ -1.16
LIG1P18858 ARL4AP3-201ENST00000441452 574 ntBASIC7.82□□□□□ -1.16
LIG1P18858 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.82□□□□□ -1.16
LIG1P18858 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AL133217.1-201ENST00000450980 425 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC002075.1-201ENST00000457396 676 ntBASIC7.82□□□□□ -1.16
LIG1P18858 RPL31P3-201ENST00000458430 332 ntBASIC7.82□□□□□ -1.16
LIG1P18858 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.82□□□□□ -1.16
LIG1P18858 RPL21P131-201ENST00000497298 483 ntBASIC7.82□□□□□ -1.16
LIG1P18858 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC7.82□□□□□ -1.16
LIG1P18858 AC091860.1-201ENST00000505723 432 ntBASIC7.82□□□□□ -1.16
LIG1P18858 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.82□□□□□ -1.16
LIG1P18858 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 RACGAP1P-201ENST00000550663 1879 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.82□□□□□ -1.16
LIG1P18858 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
LIG1P18858 AC090888.1-201ENST00000561335 1141 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC025283.1-201ENST00000572039 734 ntBASIC7.82□□□□□ -1.16
LIG1P18858 FCGR1CP-201ENST00000579737 1127 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.82□□□□□ -1.16
LIG1P18858 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC7.82□□□□□ -1.16
LIG1P18858 AC092032.1-201ENST00000603090 165 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC004492.1-201ENST00000607036 742 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AL356752.1-201ENST00000615844 593 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AC006338.2-201ENST00000616864 791 ntBASIC7.82□□□□□ -1.16
LIG1P18858 AL161420.1-201ENST00000619393 264 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms