Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NCK1P16333 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NCK1P16333 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.55□□□□□ -1.52
NCK1P16333 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
NCK1P16333 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.55□□□□□ -1.52
NCK1P16333 RBMY1HP-201ENST00000382759 1389 ntBASIC5.55□□□□□ -1.52
NCK1P16333 NAMPTP1-201ENST00000440465 2514 ntBASIC5.54□□□□□ -1.52
NCK1P16333 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.54□□□□□ -1.52
NCK1P16333 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.54□□□□□ -1.52
NCK1P16333 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NCK1P16333 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NCK1P16333 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
NCK1P16333 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.54□□□□□ -1.52
NCK1P16333 RNA5SP91-201ENST00000390902 119 ntBASIC5.54□□□□□ -1.52
NCK1P16333 AL117344.1-201ENST00000407196 616 ntBASIC5.54□□□□□ -1.52
NCK1P16333 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.54□□□□□ -1.52
NCK1P16333 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.54□□□□□ -1.52
NCK1P16333 AL360013.1-201ENST00000419031 858 ntBASIC5.54□□□□□ -1.52
NCK1P16333 MRPS21P2-201ENST00000424704 264 ntBASIC5.54□□□□□ -1.52
NCK1P16333 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.54□□□□□ -1.52
NCK1P16333 SERPINA7P1-201ENST00000443077 631 ntBASIC5.54□□□□□ -1.52
NCK1P16333 NPM1P9-201ENST00000453156 844 ntBASIC5.54□□□□□ -1.52
NCK1P16333 AC004129.2-201ENST00000457229 287 ntBASIC5.54□□□□□ -1.52
NCK1P16333 TREML3P-201ENST00000457327 501 ntBASIC5.54□□□□□ -1.52
NCK1P16333 AC006539.1-201ENST00000481419 501 ntBASIC5.54□□□□□ -1.52
NCK1P16333 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.54□□□□□ -1.52
NCK1P16333 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.54□□□□□ -1.52
NCK1P16333 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.54□□□□□ -1.52
NCK1P16333 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.54□□□□□ -1.52
NCK1P16333 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.54□□□□□ -1.52
NCK1P16333 AC025283.1-201ENST00000572039 734 ntBASIC5.54□□□□□ -1.52
NCK1P16333 AC023389.2-201ENST00000580031 955 ntBASIC5.54□□□□□ -1.52
NCK1P16333 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.54□□□□□ -1.52
NCK1P16333 AC015849.6-201ENST00000605454 474 ntBASIC5.54□□□□□ -1.52
NCK1P16333 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.54□□□□□ -1.52
NCK1P16333 RFPL4AP6-201ENST00000616792 846 ntBASIC5.54□□□□□ -1.52
NCK1P16333 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.54□□□□□ -1.52
NCK1P16333 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.54□□□□□ -1.52
NCK1P16333 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
NCK1P16333 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
NCK1P16333 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
NCK1P16333 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NCK1P16333 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
NCK1P16333 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.54□□□□□ -1.52
NCK1P16333 AL137141.1-201ENST00000624622 4836 ntBASIC5.54□□□□□ -1.52
NCK1P16333 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.54□□□□□ -1.52
NCK1P16333 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.53□□□□□ -1.52
NCK1P16333 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 RN7SKP78-201ENST00000364711 318 ntBASIC5.53□□□□□ -1.52
NCK1P16333 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 MIR27A-201ENST00000385073 78 ntBASIC5.53□□□□□ -1.52
NCK1P16333 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 SNRPEP6-201ENST00000407465 277 ntBASIC5.53□□□□□ -1.52
NCK1P16333 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.53□□□□□ -1.52
NCK1P16333 AC099677.3-201ENST00000427081 395 ntBASIC5.53□□□□□ -1.52
NCK1P16333 AC092646.1-201ENST00000427142 901 ntBASIC5.53□□□□□ -1.52
NCK1P16333 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.53□□□□□ -1.52
NCK1P16333 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 AC096775.1-201ENST00000437724 448 ntBASIC5.53□□□□□ -1.52
NCK1P16333 AC097359.1-201ENST00000447946 463 ntBASIC5.53□□□□□ -1.52
NCK1P16333 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 RN7SL790P-201ENST00000474043 298 ntBASIC5.53□□□□□ -1.52
NCK1P16333 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 AC083795.1-201ENST00000491760 320 ntBASIC5.53□□□□□ -1.52
NCK1P16333 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.53□□□□□ -1.52
NCK1P16333 AC095052.1-201ENST00000509955 863 ntBASIC5.53□□□□□ -1.52
NCK1P16333 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.53□□□□□ -1.52
NCK1P16333 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.53□□□□□ -1.52
NCK1P16333 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NCK1P16333 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 RPSAP75-201ENST00000605848 301 ntBASIC5.53□□□□□ -1.52
NCK1P16333 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.53□□□□□ -1.52
NCK1P16333 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 AC005618.4-201ENST00000625053 554 ntBASIC5.53□□□□□ -1.52
NCK1P16333 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.53□□□□□ -1.52
NCK1P16333 AC022306.1-201ENST00000560489 1562 ntBASIC5.53□□□□□ -1.52
NCK1P16333 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.53□□□□□ -1.52
NCK1P16333 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms