Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RN7SKP229-201ENST00000410465 302 ntBASIC4.73□□□□□ -1.65
CD28P10747 RN7SKP161-201ENST00000411110 305 ntBASIC4.73□□□□□ -1.65
CD28P10747 EEF1B2P8-201ENST00000414101 671 ntBASIC4.73□□□□□ -1.65
CD28P10747 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.73□□□□□ -1.65
CD28P10747 CYP4F30P-202ENST00000420048 405 ntBASIC4.73□□□□□ -1.65
CD28P10747 BX284632.2-201ENST00000421091 399 ntBASIC4.73□□□□□ -1.65
CD28P10747 AL035660.1-201ENST00000422041 222 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC245884.2-201ENST00000426257 404 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC097721.1-201ENST00000427150 1253 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.73□□□□□ -1.65
CD28P10747 VN1R110P-201ENST00000438988 971 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.73□□□□□ -1.65
CD28P10747 AL512605.1-202ENST00000441919 381 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.73□□□□□ -1.65
CD28P10747 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CD28P10747 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD28P10747 AL359955.2-201ENST00000445380 353 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.73□□□□□ -1.65
CD28P10747 AL445466.1-201ENST00000448432 357 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.73□□□□□ -1.65
CD28P10747 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.73□□□□□ -1.65
CD28P10747 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.73□□□□□ -1.65
CD28P10747 SCARNA21.2-201ENST00000516600 166 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC112191.2-201ENST00000522428 333 ntBASIC4.73□□□□□ -1.65
CD28P10747 KCTD9P4-201ENST00000526766 1166 ntBASIC4.73□□□□□ -1.65
CD28P10747 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.73□□□□□ -1.65
CD28P10747 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.73□□□□□ -1.65
CD28P10747 AC027544.3-201ENST00000535082 757 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC079600.1-201ENST00000550326 297 ntBASIC4.73□□□□□ -1.65
CD28P10747 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.73□□□□□ -1.65
CD28P10747 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.73□□□□□ -1.65
CD28P10747 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.73□□□□□ -1.65
CD28P10747 MIR4776-2-201ENST00000580204 80 ntBASIC4.73□□□□□ -1.65
CD28P10747 RNU4ATAC-201ENST00000580972 127 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.73□□□□□ -1.65
CD28P10747 AC141002.1-201ENST00000607025 279 ntBASIC4.73□□□□□ -1.65
CD28P10747 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.73□□□□□ -1.65
CD28P10747 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.73□□□□□ -1.65
CD28P10747 AC126175.1-201ENST00000617041 758 ntBASIC4.73□□□□□ -1.65
CD28P10747 AP005431.1-201ENST00000618479 319 ntBASIC4.73□□□□□ -1.65
CD28P10747 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.73□□□□□ -1.65
CD28P10747 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC4.73□□□□□ -1.65
CD28P10747 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD28P10747 EEF1A1P24-201ENST00000451469 1378 ntBASIC4.73□□□□□ -1.65
CD28P10747 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.73□□□□□ -1.65
CD28P10747 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.73□□□□□ -1.65
CD28P10747 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC4.73□□□□□ -1.65
CD28P10747 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD28P10747 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD28P10747 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD28P10747 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.73□□□□□ -1.65
CD28P10747 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.72□□□□□ -1.65
CD28P10747 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CD28P10747 AC015689.2-201ENST00000528172 1738 ntBASIC4.72□□□□□ -1.65
CD28P10747 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CD28P10747 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CD28P10747 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 FUNDC2P3-201ENST00000334716 533 ntBASIC4.72□□□□□ -1.65
CD28P10747 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.72□□□□□ -1.65
CD28P10747 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CD28P10747 AL451046.1-201ENST00000406097 534 ntBASIC4.72□□□□□ -1.65
CD28P10747 AC245060.4-201ENST00000413293 1121 ntBASIC4.72□□□□□ -1.65
CD28P10747 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.72□□□□□ -1.65
CD28P10747 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.72□□□□□ -1.65
CD28P10747 AC007568.1-201ENST00000422912 471 ntBASIC4.72□□□□□ -1.65
CD28P10747 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.72□□□□□ -1.65
CD28P10747 NPM1P25-201ENST00000429734 854 ntBASIC4.72□□□□□ -1.65
CD28P10747 GAPDHP75-201ENST00000433910 943 ntBASIC4.72□□□□□ -1.65
CD28P10747 TUBB4BP6-201ENST00000437576 479 ntBASIC4.72□□□□□ -1.65
CD28P10747 HMGN1P36-201ENST00000446623 298 ntBASIC4.72□□□□□ -1.65
CD28P10747 AC016027.4-201ENST00000450866 277 ntBASIC4.72□□□□□ -1.65
CD28P10747 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 HNRNPDLP2-201ENST00000455248 751 ntBASIC4.72□□□□□ -1.65
CD28P10747 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD28P10747 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC4.72□□□□□ -1.65
CD28P10747 OR56A7P-201ENST00000524865 941 ntBASIC4.72□□□□□ -1.65
CD28P10747 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC4.72□□□□□ -1.65
CD28P10747 RPA2P3-201ENST00000533268 770 ntBASIC4.72□□□□□ -1.65
CD28P10747 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.72□□□□□ -1.65
CD28P10747 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 ZNF322P1-201ENST00000568013 1209 ntBASIC4.72□□□□□ -1.65
CD28P10747 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC4.72□□□□□ -1.65
CD28P10747 NPIPB1P-202ENST00000588786 828 ntBASIC4.72□□□□□ -1.65
CD28P10747 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.72□□□□□ -1.65
CD28P10747 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 AL021918.2-201ENST00000613415 194 ntBASIC4.72□□□□□ -1.65
CD28P10747 AC096861.1-201ENST00000616652 240 ntBASIC4.72□□□□□ -1.65
CD28P10747 TCL6_3.1-201ENST00000619064 137 ntBASIC4.72□□□□□ -1.65
CD28P10747 MIR6886-201ENST00000619864 61 ntBASIC4.72□□□□□ -1.65
CD28P10747 AL357562.1-201ENST00000624911 609 ntBASIC4.72□□□□□ -1.65
CD28P10747 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.72□□□□□ -1.65
CD28P10747 NEPNP-201ENST00000404786 1371 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms