Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC4P09017 WDR95P-201ENST00000425638 1542 ntBASIC5.88□□□□□ -1.47
HOXC4P09017 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC4P09017 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HOXC4P09017 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 AP004289.1-201ENST00000436307 2205 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXC4P09017 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC4P09017 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC4P09017 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 AC016027.5-201ENST00000427227 210 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 AL590399.4-201ENST00000436561 601 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC4P09017 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXC4P09017 RPL31P15-201ENST00000449770 338 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 RN7SL57P-201ENST00000493687 290 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC4P09017 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC4P09017 AC114781.3-201ENST00000512083 142 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXC4P09017 OR7E158P-201ENST00000524483 910 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC4P09017 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC4P09017 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HOXC4P09017 AC004890.3-201ENST00000605566 1095 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 AL021918.2-201ENST00000613415 194 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 AL139099.4-201ENST00000614802 114 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC4P09017 AL157762.1-201ENST00000619612 415 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 AC127024.6-201ENST00000621598 424 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC4P09017 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 AC015689.2-201ENST00000528172 1738 ntBASIC5.87□□□□□ -1.47
HOXC4P09017 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC4P09017 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC4P09017 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXC4P09017 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC4P09017 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC4P09017 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC4P09017 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HOXC4P09017 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC4P09017 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC4P09017 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC4P09017 AC106872.5-201ENST00000508856 1416 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC4P09017 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC4P09017 RN7SKP292-201ENST00000365522 317 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC4P09017 RPS4XP5-201ENST00000419038 768 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC4P09017 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC4P09017 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC4P09017 AL162739.1-201ENST00000450606 307 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 RPS17P15-201ENST00000475609 349 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 AC099521.1-201ENST00000482557 334 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 AC124945.1-201ENST00000485133 188 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC4P09017 MTATP6P1-201ENST00000514057 681 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 IGLVIV-64-201ENST00000518581 301 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC4P09017 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC4P09017 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC4P09017 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC4P09017 AC008521.2-201ENST00000591021 259 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC4P09017 AL031658.2-201ENST00000616850 651 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.86□□□□□ -1.47
HOXC4P09017 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC4P09017 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC4P09017 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC4P09017 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC4P09017 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC4P09017 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC4P09017 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC4P09017 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC4P09017 KARSP1-201ENST00000451871 1752 ntBASIC5.85□□□□□ -1.47
HOXC4P09017 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HOXC4P09017 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HOXC4P09017 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC4P09017 CDY3P-201ENST00000454543 1618 ntBASIC5.85□□□□□ -1.47
HOXC4P09017 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC4P09017 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC4P09017 SNORA70H-201ENST00000383910 135 ntBASIC5.85□□□□□ -1.47
HOXC4P09017 SNORA70J-201ENST00000384182 135 ntBASIC5.85□□□□□ -1.47
HOXC4P09017 SNORA17A-201ENST00000391185 133 ntBASIC5.85□□□□□ -1.47
HOXC4P09017 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms