Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.65□□□□□ -1.34
MMP3P08254 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.65□□□□□ -1.34
MMP3P08254 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.65□□□□□ -1.34
MMP3P08254 AC007225.2-201ENST00000562529 256 ntBASIC6.65□□□□□ -1.34
MMP3P08254 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.65□□□□□ -1.34
MMP3P08254 MIR4489-201ENST00000578869 62 ntBASIC6.65□□□□□ -1.34
MMP3P08254 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MMP3P08254 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MMP3P08254 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
MMP3P08254 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MMP3P08254 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MMP3P08254 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MMP3P08254 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
MMP3P08254 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
MMP3P08254 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.65□□□□□ -1.35
MMP3P08254 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
MMP3P08254 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.64□□□□□ -1.35
MMP3P08254 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.64□□□□□ -1.35
MMP3P08254 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
MMP3P08254 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.64□□□□□ -1.35
MMP3P08254 HMGB1P20-201ENST00000402555 677 ntBASIC6.64□□□□□ -1.35
MMP3P08254 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.64□□□□□ -1.35
MMP3P08254 MRPL53P1-201ENST00000414323 319 ntBASIC6.64□□□□□ -1.35
MMP3P08254 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.64□□□□□ -1.35
MMP3P08254 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.64□□□□□ -1.35
MMP3P08254 AP000926.3-201ENST00000497201 299 ntBASIC6.64□□□□□ -1.35
MMP3P08254 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.64□□□□□ -1.35
MMP3P08254 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.64□□□□□ -1.35
MMP3P08254 OR4H6P-201ENST00000563771 921 ntBASIC6.64□□□□□ -1.35
MMP3P08254 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.64□□□□□ -1.35
MMP3P08254 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.64□□□□□ -1.35
MMP3P08254 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.64□□□□□ -1.35
MMP3P08254 AC104695.2-201ENST00000605056 775 ntBASIC6.64□□□□□ -1.35
MMP3P08254 uc_338.26-201ENST00000612659 160 ntBASIC6.64□□□□□ -1.35
MMP3P08254 NF1P10-201ENST00000613227 742 ntBASIC6.64□□□□□ -1.35
MMP3P08254 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.64□□□□□ -1.35
MMP3P08254 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
MMP3P08254 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
MMP3P08254 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
MMP3P08254 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.64□□□□□ -1.35
MMP3P08254 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 AC241584.2-201ENST00000637142 2090 ntBASIC6.64□□□□□ -1.35
MMP3P08254 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
MMP3P08254 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MMP3P08254 AC016583.1-201ENST00000624221 2431 ntBASIC6.64□□□□□ -1.35
MMP3P08254 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
MMP3P08254 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 MAPK10-270ENST00000641102 3538 ntBASIC6.63□□□□□ -1.35
MMP3P08254 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 DOCK11P1-201ENST00000553480 5932 ntBASIC6.63□□□□□ -1.35
MMP3P08254 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.63□□□□□ -1.35
MMP3P08254 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 SNORA64.1-201ENST00000362600 132 ntBASIC6.63□□□□□ -1.35
MMP3P08254 RNA5SP394-201ENST00000364216 119 ntBASIC6.63□□□□□ -1.35
MMP3P08254 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
MMP3P08254 NPM1P10-201ENST00000398310 865 ntBASIC6.63□□□□□ -1.35
MMP3P08254 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.63□□□□□ -1.35
MMP3P08254 AL391361.1-201ENST00000405580 489 ntBASIC6.63□□□□□ -1.35
MMP3P08254 Z93019.1-201ENST00000416450 973 ntBASIC6.63□□□□□ -1.35
MMP3P08254 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.63□□□□□ -1.35
MMP3P08254 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.63□□□□□ -1.35
MMP3P08254 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.63□□□□□ -1.35
MMP3P08254 AC002504.1-201ENST00000438281 691 ntBASIC6.63□□□□□ -1.35
MMP3P08254 AL136455.1-201ENST00000441083 1240 ntBASIC6.63□□□□□ -1.35
MMP3P08254 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.63□□□□□ -1.35
MMP3P08254 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 SDC4P-201ENST00000453285 601 ntBASIC6.63□□□□□ -1.35
MMP3P08254 RAB28P2-201ENST00000454299 641 ntBASIC6.63□□□□□ -1.35
MMP3P08254 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.63□□□□□ -1.35
MMP3P08254 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.63□□□□□ -1.35
MMP3P08254 RPS23P6-201ENST00000466136 431 ntBASIC6.63□□□□□ -1.35
MMP3P08254 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.63□□□□□ -1.35
MMP3P08254 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.63□□□□□ -1.35
MMP3P08254 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
MMP3P08254 ACTR6P1-201ENST00000514311 1104 ntBASIC6.63□□□□□ -1.35
MMP3P08254 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
MMP3P08254 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
MMP3P08254 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.63□□□□□ -1.35
MMP3P08254 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms