Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.93□□□□□ -1.62
CTSDP07339 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.93□□□□□ -1.62
CTSDP07339 MIR744-201ENST00000578242 98 ntBASIC4.93□□□□□ -1.62
CTSDP07339 MIR5010-201ENST00000582846 120 ntBASIC4.93□□□□□ -1.62
CTSDP07339 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.93□□□□□ -1.62
CTSDP07339 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.93□□□□□ -1.62
CTSDP07339 AC002069.2-201ENST00000603580 883 ntBASIC4.93□□□□□ -1.62
CTSDP07339 AL022311.1-201ENST00000623726 19416 ntBASIC4.93□□□□□ -1.62
CTSDP07339 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.93□□□□□ -1.62
CTSDP07339 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
CTSDP07339 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CTSDP07339 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
CTSDP07339 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CTSDP07339 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.93□□□□□ -1.62
CTSDP07339 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CTSDP07339 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CTSDP07339 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CTSDP07339 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 RPS7P8-201ENST00000418311 581 ntBASIC4.92□□□□□ -1.62
CTSDP07339 NMD3P2-201ENST00000421815 761 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 GAPDHP37-201ENST00000442317 968 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 AL031681.1-201ENST00000443304 400 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 RPS23P9-201ENST00000448848 438 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 AC015524.1-201ENST00000491585 472 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 RNA5SP434-201ENST00000516647 121 ntBASIC4.92□□□□□ -1.62
CTSDP07339 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 NATP-201ENST00000523491 878 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 AC010487.1-201ENST00000594408 1172 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.92□□□□□ -1.62
CTSDP07339 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 AL353729.2-201ENST00000605859 1249 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AL008582.1-201ENST00000609612 442 ntBASIC4.92□□□□□ -1.62
CTSDP07339 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AC007786.3-201ENST00000615154 596 ntBASIC4.92□□□□□ -1.62
CTSDP07339 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
CTSDP07339 AL445670.1-201ENST00000618889 801 ntBASIC4.92□□□□□ -1.62
CTSDP07339 MIR6811-201ENST00000620409 58 ntBASIC4.92□□□□□ -1.62
CTSDP07339 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.92□□□□□ -1.62
CTSDP07339 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CTSDP07339 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.92□□□□□ -1.62
CTSDP07339 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTSDP07339 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.91□□□□□ -1.62
CTSDP07339 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CTSDP07339 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CTSDP07339 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CTSDP07339 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.91□□□□□ -1.62
CTSDP07339 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.91□□□□□ -1.62
CTSDP07339 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CTSDP07339 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CTSDP07339 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTSDP07339 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CTSDP07339 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.91□□□□□ -1.62
CTSDP07339 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.91□□□□□ -1.62
CTSDP07339 RN7SKP144-201ENST00000411108 279 ntBASIC4.91□□□□□ -1.62
CTSDP07339 UBTFL2-201ENST00000411859 1191 ntBASIC4.91□□□□□ -1.62
CTSDP07339 AL096829.1-201ENST00000413677 457 ntBASIC4.91□□□□□ -1.62
CTSDP07339 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.91□□□□□ -1.62
CTSDP07339 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.91□□□□□ -1.62
CTSDP07339 RNGTTP1-201ENST00000420965 728 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms