Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
APOBP04114 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 AC104162.1-201ENST00000430831 2382 ntBASIC3.5□□□□□ -1.85
APOBP04114 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
APOBP04114 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
APOBP04114 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
APOBP04114 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.49□□□□□ -1.85
APOBP04114 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC3.49□□□□□ -1.85
APOBP04114 BGLT3-201ENST00000564523 994 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC3.49□□□□□ -1.85
APOBP04114 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 CASC19-221ENST00000641309 1382 ntBASIC3.49□□□□□ -1.85
APOBP04114 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 AC006206.1-201ENST00000544842 3387 ntBASIC3.49□□□□□ -1.85
APOBP04114 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC3.49□□□□□ -1.85
APOBP04114 AC068870.1-201ENST00000563737 2455 ntBASIC3.49□□□□□ -1.85
APOBP04114 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
APOBP04114 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 AC005294.1-201ENST00000355509 281 ntBASIC3.49□□□□□ -1.85
APOBP04114 RNU1-77P-201ENST00000390868 162 ntBASIC3.49□□□□□ -1.85
APOBP04114 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.49□□□□□ -1.85
APOBP04114 AC211486.3-201ENST00000412694 621 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC019050.1-201ENST00000418508 492 ntBASIC3.49□□□□□ -1.85
APOBP04114 RPL34P20-201ENST00000442771 351 ntBASIC3.49□□□□□ -1.85
APOBP04114 RN7SL51P-201ENST00000468230 285 ntBASIC3.49□□□□□ -1.85
APOBP04114 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 BLZF2P-201ENST00000553776 1130 ntBASIC3.49□□□□□ -1.85
APOBP04114 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 AL078599.1-201ENST00000402075 293 ntBASIC3.49□□□□□ -1.85
APOBP04114 RPL10P10-201ENST00000403509 664 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC092647.2-201ENST00000452998 253 ntBASIC3.49□□□□□ -1.85
APOBP04114 RPS23P7-201ENST00000466210 444 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 MAL2-207ENST00000522828 603 ntTSL 3 BASIC3.49□□□□□ -1.85
APOBP04114 AC011453.2-201ENST00000603737 729 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC245389.2-201ENST00000616023 576 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC242843.1-201ENST00000618702 573 ntBASIC3.49□□□□□ -1.85
APOBP04114 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 MXRA5Y-201ENST00000420610 8000 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 AP002364.1-201ENST00000623330 3386 ntBASIC3.49□□□□□ -1.85
APOBP04114 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 TDGF1P1-201ENST00000445734 527 ntBASIC3.49□□□□□ -1.85
APOBP04114 TPT1P13-201ENST00000449760 499 ntBASIC3.49□□□□□ -1.85
APOBP04114 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 RPL7L1P3-201ENST00000455249 689 ntBASIC3.49□□□□□ -1.85
APOBP04114 OR56A7P-201ENST00000524865 941 ntBASIC3.49□□□□□ -1.85
APOBP04114 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.49□□□□□ -1.85
APOBP04114 MIR3160-1-201ENST00000577972 85 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC010857.1-201ENST00000606398 594 ntBASIC3.49□□□□□ -1.85
APOBP04114 AC016717.3-201ENST00000624730 554 ntBASIC3.49□□□□□ -1.85
APOBP04114 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
APOBP04114 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.49□□□□□ -1.85
APOBP04114 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC3.49□□□□□ -1.85
APOBP04114 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
APOBP04114 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms