Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RAPGEF3O95398 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RAPGEF3O95398 AC010401.2-201ENST00000575137 4934 ntBASIC8.9□□□□□ -0.98
RAPGEF3O95398 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
RAPGEF3O95398 HDAC1P2-201ENST00000453661 1398 ntBASIC8.9□□□□□ -0.98
RAPGEF3O95398 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RAPGEF3O95398 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RAPGEF3O95398 FAR2P2-201ENST00000413041 594 ntBASIC8.9□□□□□ -0.98
RAPGEF3O95398 FAR2P4-202ENST00000425399 584 ntBASIC8.9□□□□□ -0.98
RAPGEF3O95398 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 GYG1P1-201ENST00000460864 698 ntBASIC8.9□□□□□ -0.98
RAPGEF3O95398 OARD1-211ENST00000480585 829 ntTSL 3 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 CR383656.6-201ENST00000550518 394 ntBASIC8.9□□□□□ -0.98
RAPGEF3O95398 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 AC007620.3-201ENST00000608131 497 ntBASIC8.9□□□□□ -0.98
RAPGEF3O95398 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC8.9□□□□□ -0.98
RAPGEF3O95398 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.99
RAPGEF3O95398 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RAPGEF3O95398 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.9□□□□□ -0.99
RAPGEF3O95398 AC018765.1-201ENST00000623357 3446 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RAPGEF3O95398 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 AL161912.4-201ENST00000623889 2468 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 GTF2IP4-201ENST00000453092 2054 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RAPGEF3O95398 RNA5SP333-201ENST00000363466 118 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 RNA5SP334-201ENST00000364825 118 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 RNA5SP131-201ENST00000365452 119 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 RNU1-106P-201ENST00000384382 164 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 RNU11-6P-201ENST00000391127 133 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 RMRPP5-201ENST00000411156 267 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 RPL26P29-201ENST00000415623 438 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 PA2G4P6-201ENST00000438325 1197 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 FCF1P7-201ENST00000451185 558 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 BX284632.1-201ENST00000478218 541 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 AC110775.1-201ENST00000513721 462 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 AC073916.1-201ENST00000545095 130 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 AL049779.2-201ENST00000553847 315 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 OR11J2P-201ENST00000555298 907 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 MIR4646-201ENST00000580775 63 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 AC119403.2-201ENST00000590960 598 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 AC005014.3-201ENST00000605985 190 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 AL353684.1-201ENST00000622677 1120 ntBASIC8.89□□□□□ -0.99
RAPGEF3O95398 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RAPGEF3O95398 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
RAPGEF3O95398 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RAPGEF3O95398 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RAPGEF3O95398 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RAPGEF3O95398 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC8.89□□□□□ -0.99
RAPGEF3O95398 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RAPGEF3O95398 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
RAPGEF3O95398 RNA5SP319-201ENST00000362768 119 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 CYP4F30P-202ENST00000420048 405 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 AL133173.1-201ENST00000423458 397 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 AC091390.2-201ENST00000432573 374 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 LDHBP2-201ENST00000456969 1005 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 AC093890.1-201ENST00000502554 540 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 DCN-210ENST00000547568 823 ntTSL 3 BASIC8.88□□□□□ -0.99
RAPGEF3O95398 AC010615.3-201ENST00000597319 394 ntBASIC8.88□□□□□ -0.99
RAPGEF3O95398 AL049840.6-202ENST00000603373 279 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms