Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 AC009171.1-201ENST00000572673 266 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 AC006557.4-201ENST00000585516 830 ntBASIC8.69□□□□□ -1.02
RNF40O75150 CD209-208ENST00000593821 807 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 AC007363.1-201ENST00000604736 620 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AL109936.2-201ENST00000605350 650 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AL356052.1-201ENST00000605764 376 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AC004908.2-201ENST00000609090 574 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AC024580.1-201ENST00000623020 674 ntBASIC8.69□□□□□ -1.02
RNF40O75150 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC8.69□□□□□ -1.02
RNF40O75150 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 AC108099.1-201ENST00000564402 3258 ntBASIC8.69□□□□□ -1.02
RNF40O75150 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC8.69□□□□□ -1.02
RNF40O75150 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC8.69□□□□□ -1.02
RNF40O75150 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.69□□□□□ -1.02
RNF40O75150 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RNF40O75150 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
RNF40O75150 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.68□□□□□ -1.02
RNF40O75150 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
RNF40O75150 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
RNF40O75150 RNU5F-7P-201ENST00000363696 115 ntBASIC8.68□□□□□ -1.02
RNF40O75150 RNU6-1251P-201ENST00000364502 107 ntBASIC8.68□□□□□ -1.02
RNF40O75150 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC8.68□□□□□ -1.02
RNF40O75150 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
RNF40O75150 SNRPEP2-201ENST00000397592 279 ntBASIC8.68□□□□□ -1.02
RNF40O75150 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 RSU1P3-201ENST00000412878 835 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AL773545.3-201ENST00000414297 706 ntBASIC8.68□□□□□ -1.02
RNF40O75150 FCF1P2-201ENST00000415284 583 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.68□□□□□ -1.02
RNF40O75150 FBP2P1-202ENST00000424473 530 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.68□□□□□ -1.02
RNF40O75150 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.68□□□□□ -1.02
RNF40O75150 AC002542.1-201ENST00000440683 193 ntBASIC8.68□□□□□ -1.02
RNF40O75150 HMGN1P32-201ENST00000441744 256 ntBASIC8.68□□□□□ -1.02
RNF40O75150 YWHAQP9-201ENST00000445891 512 ntBASIC8.68□□□□□ -1.02
RNF40O75150 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC8.68□□□□□ -1.02
RNF40O75150 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC8.68□□□□□ -1.02
RNF40O75150 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.68□□□□□ -1.02
RNF40O75150 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC8.68□□□□□ -1.02
RNF40O75150 RPS3AP14-201ENST00000483907 780 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AC108688.1-201ENST00000485817 713 ntBASIC8.68□□□□□ -1.02
RNF40O75150 EIF4E2P2-201ENST00000492033 736 ntBASIC8.68□□□□□ -1.02
RNF40O75150 RPL7AP2-201ENST00000496515 740 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC8.68□□□□□ -1.02
RNF40O75150 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.68□□□□□ -1.02
RNF40O75150 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.68□□□□□ -1.02
RNF40O75150 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.68□□□□□ -1.02
RNF40O75150 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.68□□□□□ -1.02
RNF40O75150 MIR4262-201ENST00000578394 54 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC8.68□□□□□ -1.02
RNF40O75150 MIR4258-201ENST00000580920 91 ntBASIC8.68□□□□□ -1.02
RNF40O75150 MIR3689C-201ENST00000581239 72 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AC006116.10-201ENST00000591836 581 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC8.68□□□□□ -1.02
RNF40O75150 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC8.68□□□□□ -1.02
RNF40O75150 AC136443.5-201ENST00000603741 370 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AC005084.1-201ENST00000605160 304 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AP004247.4-201ENST00000608484 942 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AL132822.1-201ENST00000617063 513 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AC245033.3-201ENST00000617986 224 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AC026336.5-201ENST00000624455 738 ntBASIC8.68□□□□□ -1.02
RNF40O75150 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.68□□□□□ -1.02
RNF40O75150 AC106800.1-201ENST00000501221 1362 ntBASIC8.68□□□□□ -1.02
RNF40O75150 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC8.68□□□□□ -1.02
RNF40O75150 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 AC012078.1-201ENST00000405035 1646 ntBASIC8.68□□□□□ -1.02
RNF40O75150 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.68□□□□□ -1.02
RNF40O75150 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RNF40O75150 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms