Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SRRM4A7MD48 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.95□□□□□ -1.62
SRRM4A7MD48 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SRRM4A7MD48 OR51C1P-202ENST00000641159 1444 ntBASIC4.95□□□□□ -1.62
SRRM4A7MD48 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SRRM4A7MD48 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC4.95□□□□□ -1.62
SRRM4A7MD48 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SRRM4A7MD48 EIF3EP1-201ENST00000433978 1316 ntBASIC4.95□□□□□ -1.62
SRRM4A7MD48 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SRRM4A7MD48 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
SRRM4A7MD48 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC018717.1-201ENST00000457712 1505 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 OR5T3-201ENST00000303059 1023 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 OR56A4-201ENST00000330728 1209 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL589826.1-201ENST00000340697 249 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL133260.1-201ENST00000405720 405 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC013470.3-201ENST00000420252 1194 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 KIF4CP-201ENST00000422742 1279 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC245291.3-201ENST00000443400 292 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL161722.1-201ENST00000446972 1032 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC239798.3-201ENST00000454459 408 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC105918.1-201ENST00000474399 838 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC007688.1-201ENST00000475592 759 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC138517.1-201ENST00000515724 568 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 SNORA74.1-201ENST00000516320 180 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 OR4V1P-201ENST00000525394 1140 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 DUX4L52-201ENST00000549363 777 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC005632.2-201ENST00000564271 828 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC008555.7-201ENST00000605008 583 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 KATNBL1P1-201ENST00000605192 748 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 RN7SL261P-201ENST00000613441 282 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 AC011416.1-201ENST00000514947 1732 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SRRM4A7MD48 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.94□□□□□ -1.62
SRRM4A7MD48 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.94□□□□□ -1.62
SRRM4A7MD48 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SRRM4A7MD48 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.93□□□□□ -1.62
SRRM4A7MD48 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SRRM4A7MD48 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.93□□□□□ -1.62
SRRM4A7MD48 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC4.93□□□□□ -1.62
SRRM4A7MD48 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC4.93□□□□□ -1.62
SRRM4A7MD48 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 RNA5SP375-201ENST00000362975 119 ntBASIC4.93□□□□□ -1.62
SRRM4A7MD48 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SRRM4A7MD48 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms