Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPC1L1Q9UHC9 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 PARP4P2-201ENST00000446672 3326 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 RNA5SP510-201ENST00000364697 99 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 MRPL53P1-201ENST00000414323 319 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 LYPLA1P1-201ENST00000434514 622 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AP006222.1-205ENST00000450734 457 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 OSTCP1-201ENST00000455507 450 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AC073610.1-201ENST00000489971 396 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AC105384.2-201ENST00000508433 640 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AC092121.1-201ENST00000569452 202 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 OR7A1P-201ENST00000601206 970 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 OR8G3P-202ENST00000641572 1255 ntBASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
NPC1L1Q9UHC9 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AP000547.3-204ENST00000588548 2523 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 MFSD8-239ENST00000641590 2479 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AC023490.2-201ENST00000359859 470 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AC019205.1-201ENST00000421830 730 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 RPL23AP19-201ENST00000436229 369 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 RPS23P6-201ENST00000466136 431 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 SUMO2P19-201ENST00000518920 295 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 IGLV3-30-201ENST00000524362 298 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 NANOGP3-201ENST00000605855 286 ntBASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.92□□□□□ -1.14
NPC1L1Q9UHC9 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 SNORA64.1-201ENST00000362600 132 ntBASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 AL357752.1-201ENST00000412817 349 ntBASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 RPS21P8-201ENST00000413365 247 ntBASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 DEFA9P-201ENST00000433042 285 ntBASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 RSU1P1-201ENST00000453416 441 ntBASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 MIR4443-201ENST00000585052 53 ntBASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 MAPK10-350ENST00000641777 965 ntBASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPC1L1Q9UHC9 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms