Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BX284632.2-201ENST00000421091 399 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC104843.2-201ENST00000427666 297 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 RPL17P35-201ENST00000432217 549 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AL512605.1-202ENST00000441919 381 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AL359955.2-201ENST00000445380 353 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC016027.4-201ENST00000450866 277 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC008628.1-201ENST00000508663 265 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 SCARNA18.1-201ENST00000516330 83 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 AP005639.1-201ENST00000526939 192 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC008521.2-201ENST00000591021 259 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 MIR6729-201ENST00000618194 65 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 AC003992.1-201ENST00000635364 557 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 PABPC1P8-201ENST00000452851 2086 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AOX3P-204ENST00000491025 2107 ntBASIC6.92□□□□□ -1.3
COL20A1Q9P218 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
COL20A1Q9P218 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
COL20A1Q9P218 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 PRNCR1-201ENST00000635449 12727 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 TMEM75-201ENST00000624314 2165 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 RNA5SP510-201ENST00000364697 99 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 AL031985.1-201ENST00000392713 418 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 MIR1203-201ENST00000408812 85 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 MTND6P12-201ENST00000428247 522 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 RPL23AP19-201ENST00000436229 369 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 CYCSP53-201ENST00000455540 265 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 SETP20-201ENST00000457046 852 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 OR51A1P-201ENST00000511110 946 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 RNU6-760P-201ENST00000516078 97 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 OR6M2P-201ENST00000529831 871 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 AC024589.2-201ENST00000605642 1294 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 OR7M1P-201ENST00000608946 533 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 AC084036.1-201ENST00000609190 508 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 AC021766.1-201ENST00000624404 741 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL20A1Q9P218 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL20A1Q9P218 CASC19-255ENST00000641733 1385 ntBASIC6.91□□□□□ -1.3
COL20A1Q9P218 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL20A1Q9P218 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
COL20A1Q9P218 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
COL20A1Q9P218 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
COL20A1Q9P218 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.9□□□□□ -1.3
COL20A1Q9P218 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL20A1Q9P218 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms