Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 RPL23AP40-201ENST00000487630 390 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 SUMO2P19-201ENST00000518920 295 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 MRPS21P8-201ENST00000569196 235 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 AL096712.1-201ENST00000614561 159 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 MIR6886-201ENST00000619864 61 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 AC104966.1-201ENST00000467010 1464 ntBASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.16□□□□□ -1.26
UPF3BQ9BZI7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 FUNDC2P3-201ENST00000334716 533 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AC023490.2-201ENST00000359859 470 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 SNORA21-201ENST00000362423 132 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AL390879.1-201ENST00000439143 386 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AMYP1-201ENST00000440059 1023 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 NPM1P19-201ENST00000450070 712 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 RN7SL254P-201ENST00000460609 284 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 COX6B1P2-201ENST00000489624 230 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 RN7SL101P-201ENST00000496350 279 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 RN7SKP288-201ENST00000516227 268 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AC027308.1-201ENST00000517993 110 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 NPIPB14P-203ENST00000532298 987 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AL512652.1-201ENST00000619006 500 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 MAPK10-350ENST00000641777 965 ntBASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.15□□□□□ -1.26
UPF3BQ9BZI7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
UPF3BQ9BZI7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
UPF3BQ9BZI7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
UPF3BQ9BZI7 AC005224.3-201ENST00000584683 2140 ntBASIC7.15□□□□□ -1.27
UPF3BQ9BZI7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
UPF3BQ9BZI7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.15□□□□□ -1.27
UPF3BQ9BZI7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
UPF3BQ9BZI7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 RN7SKP81-201ENST00000365603 331 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC104843.2-201ENST00000427666 297 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC023141.3-201ENST00000436698 278 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 CUBNP2-201ENST00000443534 1139 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 RPL5P7-201ENST00000444235 813 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC016027.4-201ENST00000450866 277 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 HMGB1P7-201ENST00000450921 612 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC084754.1-201ENST00000463466 464 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC006539.1-201ENST00000481419 501 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 TRBV5-2-201ENST00000489095 273 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 CR383658.1-201ENST00000514609 734 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 MIR4701-201ENST00000583094 63 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC067773.1-201ENST00000603284 1094 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AC096861.1-201ENST00000616652 240 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 AL357153.4-201ENST00000620487 1016 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 MAPK10-261ENST00000641050 3109 ntBASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
UPF3BQ9BZI7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms