Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 OR11H2-202ENST00000641517 1085 ntBASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 CASC19-274ENST00000642018 970 ntBASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RSPO3Q9BXY4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC027279.4-201ENST00000624371 2072 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 RN7SKP128-201ENST00000364270 303 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 RN7SKP171-201ENST00000364417 303 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 RN7SKP279-201ENST00000411383 298 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 RPS4XP5-201ENST00000419038 768 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 RPL12P12-201ENST00000424633 501 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC099677.3-201ENST00000427081 395 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AL445928.1-201ENST00000435545 222 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AL445466.1-201ENST00000448432 357 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC144530.1-201ENST00000452862 555 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 PFN1P6-201ENST00000476786 399 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC090058.1-201ENST00000498788 435 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 RN7SL284P-201ENST00000498823 275 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC112484.3-201ENST00000505910 329 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 OR56A7P-201ENST00000524865 941 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC007346.2-201ENST00000564816 892 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 NDUFA5P11-201ENST00000567995 343 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 OR7A8P-201ENST00000595427 913 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC124916.2-201ENST00000604416 224 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 MIR1910-201ENST00000636955 80 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AC123769.1-201ENST00000530992 3192 ntBASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.44□□□□□ -1.54
RSPO3Q9BXY4 AL731532.1-201ENST00000623972 4236 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 SELENOWP1-201ENST00000322792 252 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 SNORA51.9-201ENST00000384295 124 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 RN7SKP86-201ENST00000410454 332 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC242426.1-201ENST00000435270 960 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 RPS10P18-201ENST00000442662 495 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 EEF1B2P3-201ENST00000447718 678 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC068491.1-201ENST00000449539 1241 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC006539.1-201ENST00000481419 501 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 RN7SL362P-201ENST00000494228 267 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC008629.2-201ENST00000503783 483 ntBASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
RSPO3Q9BXY4 AC136777.2-201ENST00000522979 358 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms