Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 AC079776.5-201ENST00000641920 211 ntBASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 MFSD8-219ENST00000641228 2559 ntBASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 FBXL21-201ENST00000297158 1305 ntBASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 AC092451.3-201ENST00000625067 1343 ntBASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 MFSD8-239ENST00000641590 2479 ntBASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HDHD3Q9BSH5 AC140479.2-201ENST00000421567 3130 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC104964.3-201ENST00000606115 2860 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AP004607.3-201ENST00000530354 3915 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 RN7SKP78-201ENST00000364711 318 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC087752.1-201ENST00000391360 558 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 PSMA6P1-201ENST00000400275 741 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AL139805.1-201ENST00000407837 289 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC099670.2-201ENST00000435130 321 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 LINC00328-2P-201ENST00000436585 219 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC023141.3-201ENST00000436698 278 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 RPS4XP17-201ENST00000479057 754 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC090142.2-201ENST00000483263 416 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 PDCL3P4-201ENST00000489621 720 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC138517.1-201ENST00000515724 568 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 NDUFB9P1-201ENST00000604683 510 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AL031658.2-201ENST00000616850 651 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 MIR6823-201ENST00000622118 61 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 TEX41-271ENST00000628213 993 ntTSL 5 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 AL137141.1-201ENST00000624622 4836 ntBASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDHD3Q9BSH5 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 MTCO1P28-201ENST00000574177 1528 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 RNA5SP453-201ENST00000362503 119 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 RNA5SP91-201ENST00000390902 119 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 RPL7AP14-201ENST00000424041 802 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 AC096775.1-201ENST00000437724 448 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 AC009963.4-201ENST00000448535 339 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 AC099670.1-201ENST00000455141 783 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 Z83838.1-202ENST00000456225 839 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 RN7SL552P-201ENST00000462094 276 ntBASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.93□□□□□ -1.62
HDHD3Q9BSH5 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms