Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AL049870.4-201ENST00000555741 486 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 ZNF971P-201ENST00000562068 1249 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.05□□□□□ -1.44
VRK1Q99986 MIR4301-201ENST00000577203 66 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.05□□□□□ -1.44
VRK1Q99986 VN1R87P-201ENST00000596706 487 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 RPS27AP19-201ENST00000597285 458 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 NIFKP6-201ENST00000598115 845 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 Z82195.1-201ENST00000604558 398 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 U1.34-201ENST00000618578 162 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.05□□□□□ -1.44
VRK1Q99986 AC140479.4-205ENST00000636339 820 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 OR8G3P-202ENST00000641572 1255 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 AC012078.1-201ENST00000405035 1646 ntBASIC6.05□□□□□ -1.44
VRK1Q99986 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK1Q99986 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK1Q99986 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VRK1Q99986 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK1Q99986 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VRK1Q99986 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VRK1Q99986 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.05□□□□□ -1.44
VRK1Q99986 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VRK1Q99986 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
VRK1Q99986 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VRK1Q99986 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.05□□□□□ -1.44
VRK1Q99986 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK1Q99986 AL355377.1-201ENST00000621125 1653 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC073365.1-203ENST00000641055 1992 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC009220.2-201ENST00000489759 1751 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 RNU5B-1-201ENST00000363286 116 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 RNA5SP512-201ENST00000364550 120 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 RPL12P1-201ENST00000374520 498 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 GAPDHP15-201ENST00000398586 975 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 AL121916.1-201ENST00000429405 308 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK1Q99986 AL590399.4-201ENST00000436561 601 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 MTCYBP31-201ENST00000438855 1122 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC096992.1-201ENST00000459808 709 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK1Q99986 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC119751.5-201ENST00000514077 770 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 RN7SKP34-201ENST00000516142 244 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC013701.1-201ENST00000522657 465 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 OR9L1P-201ENST00000529493 933 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 OR5M6P-201ENST00000530227 937 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC008126.1-201ENST00000549019 480 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC069240.2-201ENST00000550242 609 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK1Q99986 CHEK2P2-201ENST00000554701 672 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 MIR4428-201ENST00000584884 73 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC002487.1-201ENST00000604565 994 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC104184.1-201ENST00000607513 721 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC104985.3-201ENST00000623479 597 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC034229.6-201ENST00000623704 224 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AC008626.2-201ENST00000624425 248 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AL139254.2-202ENST00000641937 1156 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK1Q99986 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
VRK1Q99986 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VRK1Q99986 AC104837.1-201ENST00000444644 1587 ntBASIC6.04□□□□□ -1.44
VRK1Q99986 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
VRK1Q99986 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VRK1Q99986 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.04□□□□□ -1.44
VRK1Q99986 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
VRK1Q99986 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VRK1Q99986 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms