Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 USP9YP3-201ENST00000434481 1766 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 CYP2G2P-201ENST00000594920 1485 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 SNORD16-201ENST00000362803 99 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC099782.1-201ENST00000425889 474 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 RPSAP32-201ENST00000432681 526 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 MED28P4-201ENST00000433137 572 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AL645931.1-201ENST00000439737 410 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 OR2L9P-201ENST00000444456 913 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 OR6K5P-201ENST00000447050 945 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 MGAT2P1-201ENST00000449718 797 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 RPL23AP64-201ENST00000469465 435 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 RPL5P12-201ENST00000477071 851 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC005017.1-201ENST00000482002 490 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC022206.1-201ENST00000495947 347 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 NAMPTP2-201ENST00000505629 1115 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 GUSBP9-201ENST00000510138 584 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 Y_RNA.655-201ENST00000515919 96 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 RN7SKP183-201ENST00000517169 324 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC005156.1-201ENST00000613371 573 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AL031667.3-201ENST00000620124 655 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AC090181.3-201ENST00000624777 1514 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 AP000547.3-204ENST00000588548 2523 ntBASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC009120.2-204ENST00000621548 2032 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 MTCO1P22-201ENST00000604619 1360 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 ARMC4P1-201ENST00000438905 707 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 H3F3AP5-201ENST00000475267 429 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 RPEP1-201ENST00000504507 658 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC020699.1-201ENST00000505161 445 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC122718.2-201ENST00000505325 591 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC008494.2-201ENST00000514544 370 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 RNA5SP418-201ENST00000515951 117 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 SOX5P1-201ENST00000524155 1127 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 OR8G5-201ENST00000524943 1041 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC113192.3-201ENST00000529152 742 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC105233.3-201ENST00000531125 744 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC005632.2-201ENST00000564271 828 ntBASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CDK5RAP1Q96SZ6 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms