Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 OR7E13P-201ENST00000526052 910 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC007494.1-201ENST00000562293 760 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC107993.1-201ENST00000591343 684 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC027334.1-201ENST00000603257 310 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AP001033.2-201ENST00000609701 1003 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC245389.2-201ENST00000616023 576 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 CXADRP3-202ENST00000617265 1100 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC242843.1-201ENST00000618702 573 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AL445528.2-201ENST00000620582 470 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 AC068787.1-201ENST00000623908 691 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 CASC19-228ENST00000641414 1684 ntBASIC5.94□□□□□ -1.46
SNX18Q96RF0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX18Q96RF0 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SNX18Q96RF0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 TRIM53CP-201ENST00000531490 1354 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 MIR365B-201ENST00000362317 111 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 RNA5SP176-201ENST00000390956 110 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 RAB5CP1-201ENST00000395972 580 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 ARSFP1-201ENST00000398758 477 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 RN7SKP205-201ENST00000410999 307 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 RPS17P17-201ENST00000419392 409 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 RPL5P2-201ENST00000429598 854 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 RN7SL372P-201ENST00000461982 298 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 MARK2P8-201ENST00000476069 952 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC091849.1-201ENST00000509920 121 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 OR52H2P-201ENST00000514607 902 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC103833.1-201ENST00000517442 172 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 MTND2P32-201ENST00000521584 1038 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 AL445383.1-201ENST00000554689 874 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC092868.3-201ENST00000560515 784 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 AL356986.1-201ENST00000604085 341 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC005277.2-201ENST00000617898 390 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 MRPL57P3-201ENST00000619218 176 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC114546.4-201ENST00000624413 369 ntBASIC5.93□□□□□ -1.46
SNX18Q96RF0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX18Q96RF0 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX18Q96RF0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.92□□□□□ -1.46
SNX18Q96RF0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SNX18Q96RF0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms