Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL049541.2-201ENST00000626377 555 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC090582.1-201ENST00000636321 199 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AC093844.1-201ENST00000514910 1361 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 AL390237.1-201ENST00000404226 1415 ntBASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTCHD1Q96NR3 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 ECM1P2-201ENST00000503354 1577 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 HSPD1P7-201ENST00000447985 1686 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 RNU4-75P-201ENST00000364621 146 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 SNORD116.1-201ENST00000365628 92 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC006511.2-201ENST00000388966 660 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 ERHP2-201ENST00000402323 299 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AL139100.1-201ENST00000408001 498 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 RN7SKP137-201ENST00000411074 307 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 RPL26P37-201ENST00000411983 438 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC245060.4-201ENST00000413293 1121 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 OR5BE1P-201ENST00000425977 939 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 C1DP1-201ENST00000426049 402 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC009303.1-201ENST00000426307 352 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 IFNNP1-201ENST00000429219 553 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 COX7BP2-201ENST00000437976 242 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AL353898.1-201ENST00000444055 238 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 OR51B8P-201ENST00000449892 769 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC104849.1-201ENST00000462623 405 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 RN7SL149P-201ENST00000465197 281 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 BZW1P2-201ENST00000473537 826 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 SYPL1P1-201ENST00000473622 768 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC069528.1-202ENST00000482888 637 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC055733.3-201ENST00000505214 523 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 SCARNA6-201ENST00000515982 265 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 RNU6-759P-201ENST00000516740 103 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 RN7SKP233-201ENST00000517005 110 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC105185.1-201ENST00000518705 535 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 OR5M6P-201ENST00000530227 937 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC007115.1-201ENST00000546853 234 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC002400.1-201ENST00000569310 726 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC091932.1-201ENST00000569381 427 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 MIR3159-201ENST00000584572 74 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC013468.1-201ENST00000608680 598 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AC015660.5-201ENST00000623238 564 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 OR5BE1P-202ENST00000641168 1176 ntBASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTCHD1Q96NR3 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms